modified circular strand example script to have length 8 domains

UC-Davis-molecular-computing · Dec 14, 2020 · c58b832 · c58b832
1 parent 8eda390
commit c58b832
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Showing 2 changed files with 11 additions and 11 deletions.
diff --git a/examples/circular.py b/examples/circular.py
@@ -3,12 +3,12 @@
 import dataclasses
 
 def create_design():
-    helices = [sc.Helix(max_offset=30) for _ in range(2)]
+    helices = [sc.Helix(max_offset=24) for _ in range(2)]
     design = sc.Design(helices=helices, grid=sc.square)
 
-    design.strand(0,0).move(10).cross(1).move(-10).as_circular()
-    design.strand(0,10).move(10).loopout(1, 5).move(-10).as_circular()
-    design.strand(0,20).move(10).cross(1).move(-10)
+    design.strand(0,0).move(8).cross(1).move(-8).as_circular()
+    design.strand(0,8).move(8).loopout(1, 5).move(-8).as_circular()
+    design.strand(0,16).move(8).cross(1).move(-8)
 
     return design
 

diff --git a/examples/output_designs/circular.sc b/examples/output_designs/circular.sc
@@ -1,5 +1,5 @@
 {
-  "version": "0.13.0",
+  "version": "0.13.1",
   "grid": "square",
   "helices": [
     {"grid_position": [0, 0]},
@@ -10,24 +10,24 @@
       "circular": true,
       "color": "#f74308",
       "domains": [
-        {"helix": 0, "forward": true, "start": 0, "end": 10},
-        {"helix": 1, "forward": false, "start": 0, "end": 10}
+        {"helix": 0, "forward": true, "start": 0, "end": 8},
+        {"helix": 1, "forward": false, "start": 0, "end": 8}
       ]
     },
     {
       "circular": true,
       "color": "#57bb00",
       "domains": [
-        {"helix": 0, "forward": true, "start": 10, "end": 20},
+        {"helix": 0, "forward": true, "start": 8, "end": 16},
         {"loopout": 5},
-        {"helix": 1, "forward": false, "start": 10, "end": 20}
+        {"helix": 1, "forward": false, "start": 8, "end": 16}
       ]
     },
     {
       "color": "#888888",
       "domains": [
-        {"helix": 0, "forward": true, "start": 20, "end": 30},
-        {"helix": 1, "forward": false, "start": 20, "end": 30}
+        {"helix": 0, "forward": true, "start": 16, "end": 24},
+        {"helix": 1, "forward": false, "start": 16, "end": 24}
       ]
     }
   ]