adds cwl-wrapper and stage #14
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| name: build | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - main | |
| - bids23 | |
| paths: | |
| # Only rebuild website when apps have changed | |
| - 'water-bodies/**' | |
| - .github/** | |
| jobs: | |
| validate: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.x | |
| - run: pip install cwltool | |
| - run: cwltool --validate water-bodies/app-package.cwl | |
| version: | |
| needs: validate | |
| runs-on: ubuntu-latest | |
| outputs: | |
| app-version: ${{ steps.set-version.outputs.version }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: wget https://github.com/mikefarah/yq/releases/download/${VERSION}/${BINARY} -O ./yq | |
| env: | |
| VERSION: v4.2.0 | |
| BINARY: yq_linux_amd64 | |
| - run: chmod +x ./yq | |
| - run: echo "APP_VERSION=$( ./yq e '."s:softwareVersion"' water-bodies/app-package.cwl | tr -d "\n" )" >> $GITHUB_ENV | |
| - run: echo app version is $APP_VERSION | |
| - id: set-version | |
| run: echo "::set-output name=version::$APP_VERSION" | |
| container-crop: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push crop image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/crop | |
| docker build water-bodies/command-line-tools/crop --file water-bodies/command-line-tools/crop/Dockerfile --tag crop | |
| docker tag crop $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| container-normalized-difference: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push norm_diff image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/norm_diff | |
| docker build water-bodies/command-line-tools/norm_diff --file water-bodies/command-line-tools/norm_diff/Dockerfile --tag norm_diff | |
| docker tag norm_diff $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| container-otsu: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push otsu image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/otsu | |
| docker build water-bodies/command-line-tools/otsu --file water-bodies/command-line-tools/otsu/Dockerfile --tag otsu | |
| docker tag otsu $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| container-stac: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push stac image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/stac | |
| docker build water-bodies/command-line-tools/stac --file water-bodies/command-line-tools/stac/Dockerfile --tag stac | |
| docker tag stac $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| container-stage: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push stage image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/stage | |
| docker build . --file containers/stage/Dockerfile --tag stage | |
| docker tag stage $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| container-cwl-wrapper: | |
| needs: version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: echo version ${{needs.version.outputs.app-version}} | |
| - run: echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin | |
| - name: build & push cwl-runner image | |
| run: | | |
| IMAGE_ID=ghcr.io/terradue/ogc-eo-application-package-hands-on/cwl-wrapper | |
| docker build . --file containers/cwl-wrapper/Dockerfile --tag cwl-wrapper | |
| docker tag cwl-wrapper $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| docker push $IMAGE_ID:${{needs.version.outputs.app-version}} | |
| publish: | |
| needs: | |
| - container-crop | |
| - container-normalized-difference | |
| - container-otsu | |
| - container-stac | |
| - version | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - run: yq -i eval '(.$graph[] | select (.id == "crop") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/crop:${{needs.version.outputs.app-version}}"' water-bodies/app-package.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "norm_diff") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/norm_diff:${{needs.version.outputs.app-version}}"' water-bodies/app-package.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "otsu") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/otsu:${{needs.version.outputs.app-version}}"' water-bodies/app-package.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "stac") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/stac:${{needs.version.outputs.app-version}}"' water-bodies/app-package.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "crop") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/crop:${{needs.version.outputs.app-version}}"' water-bodies/app-package-cloud-native.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "norm_diff") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/norm_diff:${{needs.version.outputs.app-version}}"' water-bodies/app-package-cloud-native.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "otsu") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/otsu:${{needs.version.outputs.app-version}}"' water-bodies/app-package-cloud-native.cwl | |
| - run: yq -i eval '(.$graph[] | select (.id == "stac") ).hints.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/stac:${{needs.version.outputs.app-version}}"' water-bodies/app-package-cloud-native.cwl | |
| - run: yq -i eval '(.requirements.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/stage:${{needs.version.outputs.app-version}}"' stage/stage-in.yaml | |
| - run: yq -i eval '(.requirements.DockerRequirement.dockerPull = "ghcr.io/terradue/ogc-eo-application-package-hands-on/stage:${{needs.version.outputs.app-version}}"' stage/stage-out.yaml | |
| - run: mkdir downloads | |
| - run: cp water-bodies/app-package.cwl downloads/app-water-bodies.${{needs.version.outputs.app-version}}.cwl | |
| - run: cp water-bodies/app-package-cloud-native.cwl downloads/app-water-bodies-cloud-native.${{needs.version.outputs.app-version}}.cwl | |
| - run: cp stage/stage-in.yaml downloads/stage-in.yaml | |
| - run: cp stage/stage-out.yaml downloads/stage-out.yaml | |
| - run: ls downloads/app-water-bodies.${{needs.version.outputs.app-version}}.cwl | |
| - uses: actions/upload-artifact@v2 | |
| with: | |
| name: application-package | |
| path: downloads | |
| - name: release | |
| uses: actions/create-release@v1 | |
| id: create_release | |
| with: | |
| draft: false | |
| prerelease: false | |
| release_name: ${{needs.version.outputs.app-version}} | |
| tag_name: ${{needs.version.outputs.app-version}} | |
| #body_path: CHANGELOG.md | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| - name: upload linux artifact | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: downloads/app-water-bodies.${{needs.version.outputs.app-version}}.cwl | |
| asset_name: app-water-bodies.${{needs.version.outputs.app-version}}.cwl | |
| asset_content_type: text/yaml | |
| - name: upload linux artifact cloud native | |
| uses: actions/upload-release-asset@v1 | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: downloads/app-water-bodies-cloud-native.${{needs.version.outputs.app-version}}.cwl | |
| asset_name: app-water-bodies-cloud-native.${{needs.version.outputs.app-version}}.cwl | |
| asset_content_type: text/yaml |