adds isPcr

[Kincekara]

I saw this tool as a requirement of other programs, including el_gato. Precompiled binaries do not work, and compiling it is a bit complicated. So, keeping it as a separate tool will be helpful.

Pull Request (PR) checklist:

• Include a description of what is in this pull request in this message.
• The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15 )
• Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number (i.e. spades/3.12.0/Dockerfile)
  • (optional) All test files are located in same directory as the Dockerfile (i.e. shigatyper/2.0.1/test.sh)
• Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. spades/3.12.0/README.md)
  • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
• Dockerfile includes the recommended LABELS
• Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
• Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

[erinyoung]

The test looks like it worked:

#11 [test 2/2] RUN isPcr wuhCor1.fa primers stdout
#11 0.106 >NC_045512v2:10802+11390 orf1a 589bp CTAGGACCTCTTTCTGCTCA ACACTCTCCTAGCACCATCA
#11 0.106 CTAGGACCTCTTTCTGCTCAaactggaattgccgttttagatatgtgtgc
#11 0.106 ttcattaaaagaattactgcaaaatggtatgaatggacgtaccatattgg
#11 0.106 gtagtgctttattagaagatgaatttacaccttttgatgttgttagacaa
#11 0.106 tgctcaggtgttactttccaaagtgcagtgaaaagaacaatcaagggtac
#11 0.106 acaccactggttgttactcacaattttgacttcacttttagttttagtcc
#11 0.106 agagtactcaatggtctttgttcttttttttgtatgaaaatgccttttta
#11 0.106 ccttttgctatgggtattattgctatgtctgcttttgcaatgatgtttgt
#11 0.106 caaacataagcatgcatttctctgtttgtttttgttaccttctcttgcca
#11 0.106 ctgtagcttattttaatatggtctatatgcctgctagttgggtgatgcgt
#11 0.106 attatgacatggttggatatggttgatactagtttgtctggttttaagct
#11 0.106 aaaagactgtgttatgtatgcatcagctgtagtgttactaatccttatga
#11 0.106 cagcaagaactgtgtatgaTGATGGTGCTAGGAGAGTGT
#11 DONE 0.1s

[erinyoung]

Looks good! Thank you for the PR.

I'm going to

1. merge this PR
2. deploy to dockerhub and quay using the tags '33' and 'latest'