Update to DelaunayTriangulation 1.0 (#53) #264
Annotations
11 warnings and 1 notice
Julia 1 - ubuntu-20.04 - x64 - push
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Documentation:
../../../.julia/packages/Documenter/CJeWX/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/piecewise_linear_and_natural_neighbour_interpolation_for_an_advection_diffusion_equation.md:123-139
```@example piecewise_linear_and_natural_neighbour_interpolation_for_an_advection_diffusion_equation
using CairoMakie
fig = Figure(fontsize=38)
for i in eachindex(sol)
ax = Axis(fig[1, i], width=400, height=400,
xlabel="x", ylabel="y",
title="t = $(sol.t[i])",
titlealign=:left)
tricontourf!(ax, tri, sol.u[i], levels=0:0.00001:0.001, extendhigh=:auto, extendlow=:auto, colormap=:matter)
tightlimits!(ax)
ylims!(ax, -10, 10)
end
resize_to_layout!(fig)
fig
!DelaunayTriangulation.has_vertex(tri, i) && continue
```
exception =
syntax: break or continue outside loop
Stacktrace:
[1] top-level scope
@ piecewise_linear_and_natural_neighbour_interpolation_for_an_advection_diffusion_equation.md:138
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer)
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/CJeWX/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/porous_medium_equation.md:79-95
```@example porous_medium_equation
# Step 5: Visualise
using CairoMakie
fig = Figure(fontsize=38)
for (i, j) in zip(1:3, (1, 3, 5))
ax = Axis(fig[1, i], width=600, height=600,
xlabel="x", ylabel="y",
title="t = $(sol.t[j])",
titlealign=:left)
tricontourf!(ax, tri, sol.u[j], levels=0:0.005:0.05, colormap=:matter, extendhigh=:auto)
tightlimits!(ax)
end
resize_to_layout!(fig)
fig
!DelaunayTriangulation.has_vertex(tri, i) && continue
```
exception =
syntax: break or continue outside loop
Stacktrace:
[1] top-level scope
@ porous_medium_equation.md:94
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer)
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/CJeWX/src/utilities/utilities.jl#L46
failed to run `@example` block in src/tutorials/reaction_diffusion_equation_with_a_time_dependent_dirichlet_boundary_condition_on_a_disk.md:77-91
```@example reaction_diffusion_equation_with_a_time_dependent_dirichlet_boundary_condition_on_a_disk
fig = Figure(fontsize=38)
for (i, j) in zip(1:3, (1, 6, 11))
ax = Axis(fig[1, i], width=600, height=600,
xlabel="x", ylabel="y",
title="t = $(sol.t[j])",
titlealign=:left)
tricontourf!(ax, tri, sol.u[j], levels=1:0.01:1.4, colormap=:matter)
tightlimits!(ax)
end
resize_to_layout!(fig)
fig
!DelaunayTriangulation.has_vertex(tri, i) && continue
```
exception =
syntax: break or continue outside loop
Stacktrace:
[1] top-level scope
@ reaction_diffusion_equation_with_a_time_dependent_dirichlet_boundary_condition_on_a_disk.md:90
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer)
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:752
|
Documentation:
../../../.julia/packages/Documenter/CJeWX/src/utilities/utilities.jl#L46
failed to run `@example` block in src/wyos/diffusion_equations.md:399-421
```@example diffusion_equations
BCs_prob = BoundaryConditions(mesh, (x, y, t, u, p) -> -4, Neumann)
fvm_prob = FVMProblem(mesh, BCs_prob;
diffusion_function=let D = diffusion_function
(x, y, t, u, p) -> D(x, y, p)
end,
initial_condition,
final_time)
fvm_sol = solve(fvm_prob, TRBDF2(linsolve=KLUFactorization()); saveat=100.0)
fvm_sol |> tc #hide
for j in eachindex(fvm_sol)
ax = Axis(fig[2, j], width=600, height=600,
xlabel="x", ylabel="y",
title="t = $(fvm_sol.t[j])",
titlealign=:left)
u = j == 1 ? initial_condition : fvm_sol.u[j]
tricontourf!(ax, tri, u, levels=0:0.1:1, colormap=:turbo, extendlow=:auto, extendhigh=:auto)
tightlimits!(ax)
end
resize_to_layout!(fig)
fig
```
exception =
UndefVarError: `KLUFactorization` not defined
Stacktrace:
[1] top-level scope
@ diffusion_equations.md:407
[2] eval
@ ./boot.jl:385 [inlined]
[3] #58
@ ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:754 [inlined]
[4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:753
[6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:515
[8] with_logger
@ ./logging.jl:627 [inlined]
[9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer)
@ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158
[10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/CJeWX/src/expander_pipeline.jl:752
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Documentation:
../../../.julia/packages/Documenter/CJeWX/src/html/HTMLWriter.jl#L804
For 53 @example blocks, the 'text/html' representation of the resulting
object is above the threshold (example_size_threshold: 8192 bytes).
- 53 blocks had 'image/png' fallback image representation available, using that.
On pages: math.md, tutorials/diffusion_equation_in_a_wedge_with_mixed_boundary_conditions.md, tutorials/diffusion_equation_on_a_square_plate.md, tutorials/diffusion_equation_on_an_annulus.md, tutorials/equilibrium_temperature_distribution_with_mixed_boundary_conditions_and_using_ensembleproblems.md, tutorials/helmholtz_equation_with_inhomogeneous_boundary_conditions.md, tutorials/laplaces_equation_with_internal_dirichlet_conditions.md, tutorials/mean_exit_time.md, tutorials/overview.md, tutorials/piecewise_linear_and_natural_neighbour_interpolation_for_an_advection_diffusion_equation.md, tutorials/porous_fisher_equation_and_travelling_waves.md, tutorials/porous_medium_equation.md, tutorials/reaction_diffusion_brusselator_system_of_pdes.md, tutorials/reaction_diffusion_equation_with_a_time_dependent_dirichlet_boundary_condition_on_a_disk.md, tutorials/solving_mazes_with_laplaces_equation.md, wyos/diffusion_equations.md, wyos/laplaces_equation.md, wyos/linear_reaction_diffusion_equations.md, wyos/mean_exit_time.md, wyos/poissons_equation.md
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Documentation:
../../../.julia/packages/Documenter/CJeWX/src/deploydocs.jl#L533
removing `stable` and linking `stable` to `v1.1.3`.
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Documentation:
../../../.julia/packages/Documenter/CJeWX/src/deploydocs.jl#L533
removing `v1.1` and linking `v1.1` to `v1.1.3`.
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../../../.julia/packages/Documenter/CJeWX/src/deploydocs.jl#L533
removing `v1.0` and linking `v1.0` to `v1.0.0`.
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../../../.julia/packages/Documenter/CJeWX/src/deploydocs.jl#L533
removing `v0.4` and linking `v0.4` to `v0.4.9`.
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Documentation:
../../../.julia/packages/Documenter/CJeWX/src/deploydocs.jl#L533
removing `v0.3` and linking `v0.3` to `v0.3.6`.
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[julia-buildpkg] Caching of the julia depot was not detected
Consider using `julia-actions/cache` to speed up runs https://github.com/julia-actions/cache. To ignore, set input `ignore-no-cache: true`
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