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Ensemble

Ensemble #59

Workflow file for this run

name: "Ensemble"
on:
workflow_dispatch:
schedule:
- cron: "15 11,23 * * 2,3"
jobs:
ensemble:
if: github.repository_owner == 'european-modelling-hubs'
runs-on: ubuntu-20.04
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v3
- uses: r-lib/actions/setup-r@v2
with:
install-r: false
use-public-rspm: true
- name: Install system dependencies
run: |
sudo apt-get update
sudo apt-get install libudunits2-dev libcurl4-openssl-dev libgdal-dev libopenblas-base libopenblas-dev
- uses: r-lib/actions/setup-renv@v2
- name: Create ensembles
run: Rscript 'code/ensemble/EuroCOVIDhub/create-weekly-ensemble.R'
- name: Commit files
run: |
git config user.email "[email protected]"
git config user.name "GitHub Action - mean ensemble"
git add --all
git diff-index --quiet HEAD || git commit -m "Build ensemble"
git pull --rebase origin main
git push
echo "pushed to github"
- name: Create issue about failure
if: failure() && github.event_name != 'workflow_dispatch'
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
run: |
gh issue reopen 2631