Examples #36
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Examples | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| python-version: | |
| type: string | |
| description: Version of Python (e.g., 3.12) | |
| required: false | |
| schedule: # Run once a week to detect any regressions | |
| - cron: '0 0 * * 1' | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| example: [ | |
| "Basic/example.py", | |
| "Basic/example_decorators.py", | |
| "Basic/example_parallelization.py", | |
| "Basic/sensitivity_analysis.py", | |
| "Basic/dps_example.py", | |
| "Eijgenraam/eijgenraam.py", | |
| "Eijgenraam/eijgenraam_mordm.py", | |
| "Languages/Python/lakeModelInPython.py", | |
| "Languages/R/lakeModelInR.py", | |
| #"Languages/Excel/lakeModelInExcel.py" # requires Windows | |
| "Languages/C/lakeModelInC.py"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Get Python version | |
| run: | | |
| PYTHON_VERSION="${{ inputs.python-version }}" | |
| if [ -z "$PYTHON_VERSION" ]; then | |
| PYTHON_VERSION=$(cat pyproject.toml | grep "requires-python" | grep -Eo "[0-9]+\.[0-9]+") | |
| fi | |
| echo "PYTHON_VERSION=${PYTHON_VERSION}" >> $GITHUB_ENV | |
| - name: Set up Python ${{ env.PYTHON_VERSION }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ env.PYTHON_VERSION }} | |
| cache: "pip" | |
| - name: Install dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y graphviz r-base | |
| pip install .[examples] | |
| - name: Run example | |
| run: | | |
| EXAMPLE="examples/${{ matrix.example }}" | |
| EXAMPLE_DIR=$(dirname "${EXAMPLE}") | |
| EXAMPLE_FILE=$(basename "${EXAMPLE}") | |
| pushd "${EXAMPLE_DIR}" | |
| if [ -f "Makefile" ]; then | |
| make | |
| fi | |
| IMAGES_DIR=$(realpath images/) | |
| export RHODIUM_NO_PROMPT=true | |
| export RHODIUM_FIGURE_OUTPUT="${IMAGES_DIR}" | |
| export LD_LIBRARY_PATH="$(pwd):${LD_LIBRARY_PATH}" | |
| python "${EXAMPLE_FILE}" | |
| echo "IMAGES_DIR=${IMAGES_DIR}" >> $GITHUB_ENV | |
| echo "ARTIFACT_NAME=${EXAMPLE_FILE}" >> $GITHUB_ENV | |
| - name: Upload figures | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: "${{ env.ARTIFACT_NAME }}" | |
| path: "${{ env.IMAGES_DIR }}" | |
| if-no-files-found: ignore |