GenerateEnsemble #16
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: "GenerateEnsemble" | |
on: | |
workflow_dispatch: | |
# schedule: | |
# - cron: "15 11,23 * * 2,3" | |
jobs: | |
ensemble_job: | |
runs-on: ubuntu-latest | |
steps: | |
# Checkout the python tools repo | |
# ------------------------------------------- | |
- name: checkout python tools repo | |
uses: actions/checkout@v3 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
repository: 'Predizioni-Epidemiologiche-Italia/hub-tools' | |
ref: 'main' | |
path: './tools/' | |
# Checkout the data repository | |
# ------------------------------------------- | |
- name: checkout data repo | |
uses: actions/checkout@v3 | |
with: | |
token: ${{ secrets.GITHUB_TOKEN }} | |
repository: 'Predizioni-Epidemiologiche-Italia/Influcast' | |
ref: 'main' | |
path: './repo/' | |
# Run Pyton code | |
# ------------------------- | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: '3.10' | |
- run: pip install pandas==1.2.5 isoweek==1.3.3 | |
- name: Pyhton | |
id: compute_ensemble | |
run: | | |
python ./tools/code/compute_ensemble.py | |
- name: Commit data repo changes | |
uses: EndBug/add-and-commit@v7 | |
with: | |
cwd: './repo' | |
message: "Update data storage" | |
default_author: github_actions | |
push: true | |
# Save changes to artifact for later persisting | |
- name: Save changes to artifact | |
env: | |
changed_files: ${{ steps.compute_ensemble.outputs.ensemble_file }} | |
run: | | |
echo "{ \"pr-changes\" : \"previsioni/Influcast-Ensemble/$changed_files\" }" > pr_changes.json | |
- name: Upload changes | |
uses: actions/upload-artifact@v2 | |
with: | |
name: pr_changes | |
path: ./pr_changes.json | |