Merge branch 'development' into modsForLargeArchives

DESCRIPTION

@@ -19,8 +19,8 @@ SystemRequirements: 'unrar' (Linux/macOS) or '7-Zip' (Windows) to work with '.ra
 URL: 
     https://reproducible.predictiveecology.org,
     https://github.com/PredictiveEcology/reproducible
-Date: 2024-01-05
-Version: 2.0.10.9018
+Date: 2024-03-28
+Version: 2.0.11
 Authors@R: 
     c(person(given = "Eliot J B",
              family = "McIntire",
@@ -66,7 +66,6 @@ Suggests:
     covr,
     crayon,
     DBI,
-    fastdigest,
     future,
     geodata,
     glue,

NEWS.md

@@ -29,6 +29,11 @@
 
 
 
+# reproducible 2.0.11
+
+## Remove dependency
+* fastdigest was removed from CRAN and so is removed from here.
+
 # reproducible 2.0.10
 
 ## Bug fixes

R/cache.R

@@ -36,8 +36,7 @@ utils::globalVariables(c(
 #'         Currently, only file-backed `Raster*` or `terra*` objects are digested
 #'         (e.g., not `ff` objects, or any other R object where the data
 #'         are on disk instead of in RAM);
-#'   \item Uses [digest::digest()] (formerly fastdigest, which does
-#'         not translate between operating systems).
+#'   \item Uses [digest::digest()]
 #'         This is used for file-backed objects as well.
 #'   \item Cache will save arguments passed by user in a hidden environment. Any
 #'         nested Cache functions will use arguments in this order 1) actual arguments

R/objectSize.R

@@ -40,12 +40,6 @@
 #' os1 <- utils::object.size(as.environment("package:reproducible"))
 #' (os1) # very small -- just the environment container
 #'
-#' # slow next bit
-#' \donttest{
-#' os2 <- objSize(as.environment("package:reproducible"))
-#' sum(unlist(os2)) # possibly 100+ MB, with all functions, objects
-#' # and imported functions
-#' }
 #' @details
 #' For functions, a user can include the enclosing environment as described
 #' <https://www.r-bloggers.com/2015/03/using-closures-as-objects-in-r/> and

R/options.R

@@ -31,7 +31,7 @@
 #'   \item{`cacheSpeed`}{
 #'     Default `"slow"`. One of `"slow"` or `"fast"` (1 or 2).
 #'     `"slow"` uses `digest::digest` internally, which is transferable across operating
-#'     systems, but much slower than `fastdigest::fastdigest`.
+#'     systems, but much slower than `digest::digest(algo = "spooky)`.
 #'     So, if all caching is happening on a single machine, `"fast"` would be a good setting.
 #'   }
 #'   \item{`conn`}{

R/robustDigest.R

@@ -500,10 +500,6 @@ basenames3 <- function(object, nParentDirs) {
     } else if (cacheSpeed == "slow") {
       cacheSpeed <- 1L
     }
-    if (!.requireNamespace("fastdigest", stopOnFALSE = FALSE)) {
-      cacheSpeed <- 1L
-    }
-
     out <- if (cacheSpeed == 1) {
       if (length(x) == 1) {
         if (is.atomic(x))
@@ -512,7 +508,7 @@ basenames3 <- function(object, nParentDirs) {
       }
       digest::digest(x, algo = algo)
     } else if (cacheSpeed == 2) {
-      fastdigest::fastdigest(x)
+      digest::digest(x, algo = "spooky")
     } else {
       stop("options('reproducible.cacheSpeed') must be 1, 2, 'slow' or 'fast'")
     }