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Updated VignetteBuilder field to include knitr and rmarkdown #3394

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merged 4 commits into from
Nov 4, 2024
+15 −13
Merged

Updated VignetteBuilder field to include knitr and rmarkdown #3394

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37ee1af
Updated VignetteBuilder field to include knitr and rmarkdown
Oct 28, 2024
6d55bb1
Added rmarkdown to Suggests in DESCRIPTION
Nov 2, 2024
5012765
Merge branch 'develop' into GH-3392-vignettebuilder-deps
harshagr70 Nov 2, 2024
a9b76ff
update deps
infotroph Nov 3, 2024
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2 changes: 1 addition & 1 deletion base/db/DESCRIPTION
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Original file line number Diff line number Diff line change
Expand Up @@ -73,7 +73,7 @@ Suggests:
tidyverse,
withr
License: BSD_3_clause + file LICENSE
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
Copyright: Authors
LazyLoad: yes
LazyData: FALSE
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2 changes: 1 addition & 1 deletion base/qaqc/DESCRIPTION
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Expand Up @@ -35,6 +35,6 @@ Copyright: Authors
LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
Config/testthat/edition: 3
RoxygenNote: 7.3.2
2 changes: 1 addition & 1 deletion base/visualization/DESCRIPTION
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Expand Up @@ -51,6 +51,6 @@ Copyright: Authors
LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
1 change: 1 addition & 0 deletions docker/depends/pecan_package_dependencies.csv
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Expand Up @@ -495,6 +495,7 @@
"rmarkdown","*","models/biocro","Suggests",FALSE
"rmarkdown","*","models/ed","Suggests",FALSE
"rmarkdown","*","models/maat","Suggests",FALSE
"rmarkdown","*","modules/data.atmosphere","Suggests",FALSE
"rmarkdown","*","modules/priors","Suggests",FALSE
"rmarkdown","*","modules/rtm","Suggests",FALSE
"rmarkdown",">= 2.19","base/db","Suggests",FALSE
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2 changes: 1 addition & 1 deletion models/biocro/DESCRIPTION
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Expand Up @@ -38,5 +38,5 @@ Remotes:
License: BSD_3_clause + file LICENSE
Copyright: Energy Biosciences Institute, Authors
Encoding: UTF-8
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
RoxygenNote: 7.3.2
2 changes: 1 addition & 1 deletion models/ed/DESCRIPTION
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Expand Up @@ -63,7 +63,7 @@ Suggests:
Additional_repositories: https://pecanproject.r-universe.dev/
License: BSD_3_clause + file LICENSE
Copyright: Authors
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
LazyData: true
Encoding: UTF-8
RoxygenNote: 7.3.2
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2 changes: 1 addition & 1 deletion models/maat/DESCRIPTION
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Expand Up @@ -23,7 +23,7 @@ SystemRequirements: MAAT
OS_type: unix
License: BSD_3_clause + file LICENSE
Copyright: Authors
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
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2 changes: 1 addition & 1 deletion modules/allometry/DESCRIPTION
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Expand Up @@ -30,4 +30,4 @@ LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
2 changes: 1 addition & 1 deletion modules/assim.batch/DESCRIPTION
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Expand Up @@ -14,7 +14,7 @@ Description: The Predictive Ecosystem Carbon Analyzer (PEcAn) is a scientific
model parameterization, execution, and analysis. The goal of PECAn is to
streamline the interaction between data and models, and to improve the
efficacy of scientific investigation.
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
Imports:
abind,
BayesianTools,
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3 changes: 2 additions & 1 deletion modules/data.atmosphere/DESCRIPTION
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Expand Up @@ -69,6 +69,7 @@ Suggests:
PEcAn.settings,
progress,
reticulate,
rmarkdown,
testthat (>= 3.1.7),
withr
Remotes:
Expand All @@ -80,6 +81,6 @@ License: BSD_3_clause + file LICENSE
Copyright: Authors
LazyLoad: yes
LazyData: FALSE
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
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Encoding: UTF-8
RoxygenNote: 7.3.2
2 changes: 1 addition & 1 deletion modules/meta.analysis/DESCRIPTION
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Expand Up @@ -42,7 +42,7 @@ Suggests:
testthat (>= 1.0.2)
SystemRequirements: JAGS
License: BSD_3_clause + file LICENSE
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
Copyright: Authors
LazyData: FALSE
Encoding: UTF-8
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2 changes: 1 addition & 1 deletion modules/photosynthesis/DESCRIPTION
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Expand Up @@ -36,4 +36,4 @@ LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
2 changes: 1 addition & 1 deletion modules/priors/DESCRIPTION
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Expand Up @@ -24,5 +24,5 @@ Suggests:
rmarkdown,
testthat
Encoding: UTF-8
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
RoxygenNote: 7.3.2
2 changes: 1 addition & 1 deletion modules/rtm/DESCRIPTION
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Expand Up @@ -37,6 +37,6 @@ Copyright: Authors
LazyLoad: yes
LazyData: FALSE
Encoding: UTF-8
VignetteBuilder: knitr
VignetteBuilder: knitr, rmarkdown
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
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