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Consistent indents in 02_pecan_standards.Rmd
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Updated so that indents are consistent, e.g. 'input standards' and 'output standards' are at the same level, and will show up in TOC on left
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dlebauer authored Sep 11, 2024
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15 changes: 8 additions & 7 deletions book_source/03_topical_pages/02_pecan_standards.Rmd
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Expand Up @@ -10,11 +10,11 @@ Internal PEcAn standard time follows ISO_8601 format for dates and time (https:/

To aid in the conversion between PEcAn internal ISO_8601 standard and CF convention used in all met drivers and PEcAn standard output you can utilize the functions: "cf2datetime","datetime2doy","cf2doy", and for SIPNET "sipnet2datetime"

### Input Standards
## Input Standards

#### Meterology Standards
### Meterology Standards

##### Dimensions:
#### Dimensions:


|CF standard-name | units |
Expand All @@ -26,7 +26,8 @@ To aid in the conversion between PEcAn internal ISO_8601 standard and CF convent
General Note: dates in the database should be date-time (preferably with timezone), and datetime passed around in PEcAn should be of type POSIXct.


##### The variable names should be `standard_name`
#### Variable names should be `standard_name`

```{r, echo=FALSE,warning=FALSE,message=FALSE}
names<-c("<b>air_temperature</b>", "air_temperature_max", "air_temperature_min", "<b>air_pressure</b>",
"mole_fraction_of_carbon_dioxide_in_air", "moisture_content_of_soil_layer", "soil_temperature ",
Expand Down Expand Up @@ -75,15 +76,15 @@ The key is to process each type of met data (site, reanalysis, forecast, climate

### Soils and Vegetation Inputs

##### Soil Data
#### Soil Data

See the [Soil Data] section on more into on creating a standard soil data file.

##### Vegetation Data
#### Vegetation Data

See the [Vegetation Data] section on more info on creating a standard vegetation data file

### Output Standards {#OutputStandards}
## Output Standards {#OutputStandards}

* created by `model2netcdf` functions
* based on format used by [MsTMIP](http://nacp.ornl.gov/MsTMIP_variables.shtml)
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