Adding Workflow to run Integration Tests #25

	name : Integration Tests
	on :
	# allow manual triggering
	workflow_dispatch:

	# for debugging
	push:
	pull_request:

	schedule:
	# run Thursday 4:30 AM UTC
	- cron: '30 4 * * 4'
	jobs:
	test:
	runs-on: ubuntu-latest-4cores-16gb-20.04

	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

	container:
	image: pecan/base:develop

	steps:
	- name: Checkout source code
	uses: actions/checkout@v3

	- name: CDS API file setup
	run: \|
	echo "url: https://cds.climate.copernicus.eu/api/v2" >> .cdsapirc
	echo "key: ${{ secrets.ERA5_API_KEY }}" >> .cdsapirc

	- name: Print Output to Console
	run: \|
	cat .cdsapirc

	- name: Set up Python
	uses: actions/setup-python@v2

	- name: Download glibc
	run: \|
	apt install libc6

	- name: Install dependencies
	uses: BSFishy/pip-action@v1
	with:
	packages: \|
	cdsapi

	- name: Run tests
	run: \|
	for FILE in modules/data.atmosphere/inst/integrationTests/*; do
	Rscript $FILE;
	done

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