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Initial version 2.4.0 changelog
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armintoepfer committed Nov 22, 2021
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18 changes: 17 additions & 1 deletion docs/changelog.md
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# Version changelog

* **2.2.0**:
* **2.4.0**:
* Fix fasta/q input and `--guess`
* Output empty files for missing barcode pairs `--output-missing-pairs`
* Output each barcode into its own sub-directory `--split-subdirs`
* Passthrough of input ExternalResources in XML
* Add Provenance element to XML output
* Do not override Sample tag `SM` in read group if `--isoseq` is used
* Enable `--reuse-uuids` with `--biosample-csv`
* Add `--reuse-source-uuid` from input XML
* Store BioSamples under WellSample
* Allow `--dataset-name` to override dataset name attribute

* 2.3.0:
* SMRT Link v10.2 release
* Add `--preset` for `HIFI-SYMMETRIC` and `HIFI-ASYMMETRIC`

* 2.2.0:
* Add `--no-clip` to assign a barcode pair, but not clip barcode sequences from reads
* Output `.consensusreadset.xml` for CCS/HiFi input
* Add `--biosample-csv` to assign [bio sample names](/faq/biosample) to barcode pairs
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2 changes: 1 addition & 1 deletion docs/index.md
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Expand Up @@ -23,7 +23,7 @@ Please refer to our [official pbbioconda page](https://github.com/PacificBioscie
for information on Installation, Support, License, Copyright, and Disclaimer.

## Latest Version
Version **2.1.0**: [Full changelog here](/changelog)
Version **2.4.0**: [Full changelog here](/changelog)

## What's new!
New documentation is up, a 1:1 port from the original GitHub docs with minor
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