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update wdl-common
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@gconcepcion
gconcepcion committed Nov 15, 2023
1 parent cc5afcb commit fe8b97f
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflows/wdl-common
Submodule wdl-common updated 18 files
+2 −2 wdl/tasks/bcftools_stats.wdl
+59 −0 wdl/tasks/concat_vcf.wdl
+2 −2 wdl/tasks/glnexus.wdl
+1 −1 wdl/tasks/mosdepth.wdl
+42 −5 wdl/tasks/pbsv_call.wdl
+1 −1 wdl/tasks/pbsv_discover.wdl
+0 −272 wdl/tasks/pharmcat.wdl
+1 −1 wdl/tasks/samtools_fasta.wdl
+1 −1 wdl/tasks/whatshap_haplotag.wdl
+2 −2 wdl/tasks/whatshap_phase.wdl
+1 −1 wdl/tasks/whatshap_stats.wdl
+1 −1 wdl/tasks/zip_index_vcf.wdl
+3 −3 wdl/workflows/deepvariant/deepvariant.wdl
+170 −0 wdl/workflows/hiphase/hiphase.wdl
+29 −0 wdl/workflows/hiphase/inputs.json
+28 −0 wdl/workflows/pharmcat/inputs.json
+271 −0 wdl/workflows/pharmcat/pharmcat.wdl
+3 −3 wdl/workflows/phase_vcf/phase_vcf.wdl

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