Code

Adding reactions from ims837#3

Code

Merged

JamesPino merged 5 commits intomainPNNL-CompBio/SElon7942-GEM:mainfrom add_missing_rxnsPNNL-CompBio/SElon7942-GEM:add_missing_rxnsCopy head branch name to clipboardMar 12, 2024

+51,851-29,699

Commits

Commits on Jan 9, 2024

• Adding gapfilling code and optknock removal of reactions to optimize sucrose (compress_model.ipynb)

  JamesPino

  committed
  bdf2d24

• Adding reactions from ijb792, removing reactions added from gapfill. Keeping those separate until additional evidence is found to support addition.

  JamesPino

  committed
  686d74c

Commits on Jan 16, 2024

• Adding gapfilling code and optknock removal of reactions to optimize sucrose (compress_model.ipynb)

  Show description for 6247d6a
  JamesPino

  committed
  6247d6a

Commits on Jan 27, 2024

• Generated straindesign class to help overcome hurdles with finding bugs.

  Show description for 154a87b
  JamesPino

  committed
  154a87b

Commits on Mar 12, 2024

• Adding updates to model from ims837.

  JamesPino

  committed
  4521a8d