some fixes and allow arbitrary types at get/setitem

[jpfeuffer]

User description

related to #184

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PR Type

enhancement, bug_fix

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Description

• Enhanced the __getitem__ and __setitem__ methods to support arbitrary types, not just size_t and similar.
• Added checks to ensure getitem and setitem methods only support a single argument.
• Removed unnecessary signedness checks for indices in __getitem__.
• Updated method signatures to accommodate arbitrary types, improving flexibility.
• Modified matching_python_type in ConversionProvider to return "int" for non-pointer types.

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Changes walkthrough 📝

Relevant files

Enhancement

CodeGenerator.py Enhance `getitem` and `setitem` methods to support arbitrary types autowrap/CodeGenerator.py Added support for arbitrary types in __getitem__ and __setitem__ methods. Introduced checks for single argument support in getitem and setitem methods. Removed unnecessary signedness checks for indices. Updated method signatures to accommodate arbitrary types. +20/-14  ConversionProvider.py Update matching Python type for non-pointer C++ types        autowrap/ConversionProvider.py Updated matching_python_type to return "int" for non-pointer types. +1/-1

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PR Reviewer Guide 🔍

Here are some key observations to aid the review process:

🎫 Ticket compliance analysis 🔶 184 - Partially compliant Fully compliant requirements: Fix incorrect handling of size types in get_item Address signedness warnings due to using signed long type after checking positivity Not compliant requirements: Support get_item with strings for dict-like objects Check for invalid indexes before converting to a fitting datatype

⏱️ Estimated effort to review: 3 🔵🔵🔵⚪⚪

🧪 No relevant tests

🔒 No security concerns identified

⚡ Recommended focus areas for review Incomplete Implementation The PR adds support for arbitrary types in getitem and setitem, but doesn't specifically handle strings for dict-like objects as requested in the ticket. Missing Validation The code doesn't check for invalid indexes before converting to a fitting datatype, which was a requirement in the ticket. Type Consistency The setitem method uses different type annotations in the stub code and the actual implementation. This inconsistency should be addressed.

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PR Code Suggestions ✨

Explore these optional code suggestions:

Category	Suggestion	Score
Possible bug	Add bounds checking for array index access Consider adding error handling for cases where the index might be out of bounds, especially since the signedness check has been removed. autowrap/CodeGenerator.py [1676] cdef $ctype _idx = $call_arg +if _idx < 0 or _idx >= self._size: # Assuming self._size exists + raise IndexError("Index out of range") Apply this suggestion Suggestion importance[1-10]: 8 Why: This suggestion adds important bounds checking that was removed in the PR. It helps prevent potential index out of range errors, significantly improving the robustness of the code.	8
Possible issue	Implement a type check for the getitem method argument Consider adding a check to ensure that ctype is a basic type (class or builtin, not list/dict) before proceeding with the method implementation. autowrap/CodeGenerator.py [1664-1665] -# TODO make sure it is a basic type (class or builtin, no list/dict) ctype, _ = mdcl.arguments[0] +if not isinstance(ctype, (Class, Builtin)): + raise TypeError("getitem method only supports basic types (class or builtin)") Apply this suggestion Suggestion importance[1-10]: 7 Why: This suggestion addresses an important TODO comment and adds a crucial type check, which could prevent potential runtime errors. It's a valuable addition to ensure type safety.	7
	Add type checking for the value parameter in __setitem__ method Consider adding a type check for the 'value' parameter in the setitem method to ensure it matches the expected type. autowrap/CodeGenerator.py [1774-1776] def __setitem__(self, $ctype_in key, $res_t_base value): """$docstring""" assert isinstance(key, int), 'arg index wrong type' + assert isinstance(value, $res_t_base), 'value is of wrong type' Apply this suggestion Suggestion importance[1-10]: 6 Why: The suggestion adds a valuable type check for the 'value' parameter, which complements the existing check for the 'key'. This improves type safety and can prevent potential bugs.	6
Maintainability	Use more descriptive variable names to enhance code readability Consider using a more descriptive variable name instead of ctype to improve code readability and maintainability. autowrap/CodeGenerator.py [1665] -ctype, _ = mdcl.arguments[0] +index_type, _ = mdcl.arguments[0] Apply this suggestion Suggestion importance[1-10]: 3 Why: The suggestion improves code readability slightly by using a more descriptive variable name. However, the impact is minimal as the current name 'ctype' is already somewhat clear in context.	3

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CI Failure Feedback 🧐

Action: test (<=0.29.21, 3.9)

Failed stage: run tests [❌]

Failed test name: test_stl_libcpp

Failure summary: The action failed due to two test failures: test_minimal in tests/test_code_generator_minimal.py failed with an AssertionError. The failure occurred because the subprocess command to build the extension did not return a zero exit code, indicating a build failure. test_stl_libcpp in tests/test_code_generator_stllibcpp.py failed with an AttributeError. The error was caused by an attempt to access the base_type attribute on an EncodedString object, which does not have this attribute.

Relevant error logs: 1: ##[group]Operating System 2: Ubuntu ... 643: tests/test_code_generator_stllibcpp.py F [ 16%] 644: tests/test_cython_build_process.py .. [ 18%] 645: tests/test_decl_resolver.py .......................... [ 51%] 646: tests/test_full_library.py . [ 52%] 647: tests/test_main.py .. [ 55%] 648: tests/test_pxd_parser.py .......................... [ 87%] 649: tests/test_types.py ..... [ 93%] 650: tests/test_utils.py ..... [100%] 651: =================================== FAILURES =================================== ... 698: import sys 699: tempdir = tempfile.mkdtemp() 700: if debug: 701: print("\n") 702: print("tempdir=", tempdir) 703: print("\n") 704: for source_file in source_files: 705: if source_file[-4:] != ".pyx" and source_file[-4:] != ".cpp": 706: raise NameError("Expected pyx and/or cpp files as source files for compilation.") ... 742: print("-" * 70) 743: print("\n") 744: > assert ( 745: subprocess.Popen( 746: "%s setup.py build_ext --force --inplace" % sys.executable, shell=True 747: ).wait() 748: == 0 749: ) 750: E AssertionError 751: /home/runner/work/autowrap/autowrap/autowrap/Utils.py:132: AssertionError ... 902: def __set__(self, bool m_bool): 903: self.inst.get().m_bool = (<bool>m_bool) 904: def __get__(self): 905: cdef bool _r = self.inst.get().m_bool 906: py_result = <bool>_r 907: return py_result 908: property m_const: 909: def __set__(self, int m_const): 910: raise AttributeError("Cannot set constant") 911: def __get__(self): 912: cdef int _r = self.inst.get().m_const 913: py_result = <int>_r 914: return py_result 915: property m_constdef: 916: def __set__(self, int m_constdef): 917: raise AttributeError("Cannot set constant") ... 1218: return py_result 1219: def __getitem__(self, index ): 1220: """ 1221: __getitem__(self, index: int ) -> int 1222: """ 1223: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1224: cdef index _idx = (<size_t>index) 1225: if _idx >= self.inst.get().size(): 1226: raise IndexError("invalid index %d" % _idx) ... 1413: def __irshift__(Minimal self, Minimal other not None): 1414: cdef _Minimal * this = self.inst.get() 1415: cdef _Minimal * that = other.inst.get() 1416: _irshift(this, that) 1417: return self 1418: def __richcmp__(self, other, op): 1419: if op not in (2,): 1420: op_str = {0: '<', 2: '==', 4: '>', 1: '<=', 3: '!=', 5: '>='}[op] 1421: raise NotImplementedError("Comparison operator %s not implemented" % op_str) 1422: if not isinstance(other, Minimal): 1423: raise NotImplementedError("Comparison currently only allowed with objects of the same type. Use isinstance and define yourself.") ... 1450: building 'wrapped' extension 1451: creating build 1452: creating build/temp.linux-x86_64-3.9 1453: gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/home/runner/work/autowrap/autowrap/autowrap/data_files/boost -I/home/runner/work/autowrap/autowrap/autowrap/data_files -I/home/runner/work/autowrap/autowrap/autowrap/data_files/autowrap -I/home/runner/work/autowrap/autowrap/tests/test_files -I/opt/hostedtoolcache/Python/3.9.20/x64/include/python3.9 -c minimal.cpp -o build/temp.linux-x86_64-3.9/minimal.o -std=c++11 -Wno-unused-but-set-variable 1454: gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/home/runner/work/autowrap/autowrap/autowrap/data_files/boost -I/home/runner/work/autowrap/autowrap/autowrap/data_files -I/home/runner/work/autowrap/autowrap/autowrap/data_files/autowrap -I/home/runner/work/autowrap/autowrap/tests/test_files -I/opt/hostedtoolcache/Python/3.9.20/x64/include/python3.9 -c minimal_wrapper.cpp -o build/temp.linux-x86_64-3.9/minimal_wrapper.o -std=c++11 -Wno-unused-but-set-variable 1455: ----------------------------- Captured stderr call ----------------------------- 1456: /opt/hostedtoolcache/Python/3.9.20/x64/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmprzwhd2he/minimal_wrapper.pyx 1457: tree = Parsing.p_module(s, pxd, full_module_name) 1458: Error compiling Cython file: ... 1461: """ 1462: __getitem__(self, index: int ) -> int 1463: """ 1464: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1465: cdef index _idx = (<size_t>index) 1466: ^ 1467: ------------------------------------------------------------ 1468: minimal_wrapper.pyx:517:13: 'index' is not a type identifier 1469: minimal_wrapper.cpp:1:2: error: #error Do not use this file, it is the result of a failed Cython compilation. 1470: 1 | #error Do not use this file, it is the result of a failed Cython compilation. 1471: | ^~~~~ 1472: error: command '/usr/bin/gcc' failed with exit code 1 ... 1563: self = <autowrap.ConversionProvider.ConverterRegistry object at 0x7f28d4b103a0> 1564: cpp_type = 'index' 1565: def get(self, cpp_type: CppType) -> TypeConverterBase: 1566: """ 1567: Gets a conversion provider that inherits from TypeConverterBase and matches both cpp_type.base_type 1568: and the matches function from the successfully looked-up TypeConverter 1569: :param cpp_type: CppType 1570: :return: TypeConverterBase 1571: :except: NameError 1572: """ 1573: > rv = [conv for conv in self.lookup[cpp_type.base_type] if conv.matches(cpp_type)] 1574: E AttributeError: 'EncodedString' object has no attribute 'base_type' 1575: /home/runner/work/autowrap/autowrap/autowrap/ConversionProvider.py:2209: AttributeError ... 1612: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[IntWrapper,int] process_8_map (['int in_'])' 1613: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_9_map (['libcpp_map[int,IntWrapper] & in_'])' 1614: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[int,IntWrapper] process_10_map (['int in_'])' 1615: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: shared_ptr[const IntWrapper] process_11_const ([])' 1616: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_12_map (['libcpp_map[libcpp_string,IntWrapper] & in_'])' 1617: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_13_map (['libcpp_map[IntWrapper,libcpp_vector[int]] & in_'])' 1618: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_14_map (['libcpp_map[IntWrapper,IntVecWrapper] & in_'])' 1619: =========================== short test summary info ============================ 1620: FAILED tests/test_code_generator_minimal.py::test_minimal - AssertionError 1621: FAILED tests/test_code_generator_stllibcpp.py::test_stl_libcpp - AttributeError: 'EncodedString' object has no attribute 'base_type' 1622: ======================== 2 failed, 78 passed in 46.09s ========================= 1623: ##[error]Process completed with exit code 1.

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CI Failure Feedback 🧐

Action: test (<=0.29.21, 3.7)

Failed stage: run tests [❌]

Failed test name: test_stl_libcpp

Failure summary: The action failed due to two test failures: test_minimal in tests/test_code_generator_minimal.py failed with an AssertionError. The assertion failed because the subprocess command for building extensions did not return a zero exit status, indicating a failure in the build process. test_stl_libcpp in tests/test_code_generator_stllibcpp.py failed with an AttributeError. The error occurred because an 'EncodedString' object was accessed for an attribute base_type that does not exist.

Relevant error logs: 1: ##[group]Operating System 2: Ubuntu ... 665: tests/test_code_generator_stllibcpp.py F [ 16%] 666: tests/test_cython_build_process.py .. [ 18%] 667: tests/test_decl_resolver.py .......................... [ 51%] 668: tests/test_full_library.py . [ 52%] 669: tests/test_main.py .. [ 55%] 670: tests/test_pxd_parser.py .......................... [ 87%] 671: tests/test_types.py ..... [ 93%] 672: tests/test_utils.py ..... [100%] 673: =================================== FAILURES =================================== ... 720: import sys 721: tempdir = tempfile.mkdtemp() 722: if debug: 723: print("\n") 724: print("tempdir=", tempdir) 725: print("\n") 726: for source_file in source_files: 727: if source_file[-4:] != ".pyx" and source_file[-4:] != ".cpp": 728: raise NameError("Expected pyx and/or cpp files as source files for compilation.") ... 764: print("-" * 70) 765: print("\n") 766: assert ( 767: subprocess.Popen( 768: "%s setup.py build_ext --force --inplace" % sys.executable, shell=True 769: ).wait() 770: > == 0 771: ) 772: E AssertionError 773: /home/runner/work/autowrap/autowrap/autowrap/Utils.py:136: AssertionError ... 924: def __set__(self, bool m_bool): 925: self.inst.get().m_bool = (<bool>m_bool) 926: def __get__(self): 927: cdef bool _r = self.inst.get().m_bool 928: py_result = <bool>_r 929: return py_result 930: property m_const: 931: def __set__(self, int m_const): 932: raise AttributeError("Cannot set constant") 933: def __get__(self): 934: cdef int _r = self.inst.get().m_const 935: py_result = <int>_r 936: return py_result 937: property m_constdef: 938: def __set__(self, int m_constdef): 939: raise AttributeError("Cannot set constant") ... 1240: return py_result 1241: def __getitem__(self, index ): 1242: """ 1243: __getitem__(self, index: int ) -> int 1244: """ 1245: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1246: cdef index _idx = (<size_t>index) 1247: if _idx >= self.inst.get().size(): 1248: raise IndexError("invalid index %d" % _idx) ... 1435: def __irshift__(Minimal self, Minimal other not None): 1436: cdef _Minimal * this = self.inst.get() 1437: cdef _Minimal * that = other.inst.get() 1438: _irshift(this, that) 1439: return self 1440: def __richcmp__(self, other, op): 1441: if op not in (2,): 1442: op_str = {0: '<', 2: '==', 4: '>', 1: '<=', 3: '!=', 5: '>='}[op] 1443: raise NotImplementedError("Comparison operator %s not implemented" % op_str) 1444: if not isinstance(other, Minimal): 1445: raise NotImplementedError("Comparison currently only allowed with objects of the same type. Use isinstance and define yourself.") ... 1469: Autowrap has wrapped 1 classes, 52 methods and 1 enums 1470: running build_ext 1471: cythoning minimal_wrapper.pyx to minimal_wrapper.cpp 1472: building 'wrapped' extension 1473: creating build 1474: creating build/temp.linux-x86_64-3.7 1475: gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/home/runner/work/autowrap/autowrap/autowrap/data_files/boost -I/home/runner/work/autowrap/autowrap/autowrap/data_files -I/home/runner/work/autowrap/autowrap/autowrap/data_files/autowrap -I/home/runner/work/autowrap/autowrap/tests/test_files -I/opt/hostedtoolcache/Python/3.7.17/x64/include/python3.7m -c minimal_wrapper.cpp -o build/temp.linux-x86_64-3.7/minimal_wrapper.o -std=c++11 -Wno-unused-but-set-variable 1476: ----------------------------- Captured stderr call ----------------------------- 1477: minimal_wrapper.cpp:1:2: error: #error Do not use this file, it is the result of a failed Cython compilation. 1478: 1 | #error Do not use this file, it is the result of a failed Cython compilation. 1479: | ^~~~~ 1480: /opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/tmp200fgwmt/minimal_wrapper.pyx 1481: tree = Parsing.p_module(s, pxd, full_module_name) 1482: Error compiling Cython file: ... 1485: """ 1486: __getitem__(self, index: int ) -> int 1487: """ 1488: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1489: cdef index _idx = (<size_t>index) 1490: ^ 1491: ------------------------------------------------------------ 1492: minimal_wrapper.pyx:517:13: 'index' is not a type identifier 1493: error: command 'gcc' failed with exit status 1 ... 1584: self = <autowrap.ConversionProvider.ConverterRegistry object at 0x7fb872b868d0> 1585: cpp_type = 'index' 1586: def get(self, cpp_type: CppType) -> TypeConverterBase: 1587: """ 1588: Gets a conversion provider that inherits from TypeConverterBase and matches both cpp_type.base_type 1589: and the matches function from the successfully looked-up TypeConverter 1590: :param cpp_type: CppType 1591: :return: TypeConverterBase 1592: :except: NameError 1593: """ 1594: > rv = [conv for conv in self.lookup[cpp_type.base_type] if conv.matches(cpp_type)] 1595: E AttributeError: 'EncodedString' object has no attribute 'base_type' 1596: /home/runner/work/autowrap/autowrap/autowrap/ConversionProvider.py:2209: AttributeError ... 1633: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[IntWrapper,int] process_8_map (['int in_'])' 1634: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_9_map (['libcpp_map[int,IntWrapper] & in_'])' 1635: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[int,IntWrapper] process_10_map (['int in_'])' 1636: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: shared_ptr[const IntWrapper] process_11_const ([])' 1637: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_12_map (['libcpp_map[libcpp_string,IntWrapper] & in_'])' 1638: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_13_map (['libcpp_map[IntWrapper,libcpp_vector[int]] & in_'])' 1639: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_14_map (['libcpp_map[IntWrapper,IntVecWrapper] & in_'])' 1640: =========================== short test summary info ============================ 1641: FAILED tests/test_code_generator_minimal.py::test_minimal - AssertionError 1642: FAILED tests/test_code_generator_stllibcpp.py::test_stl_libcpp - AttributeError: 'EncodedString' object has no attribute 'base_type' 1643: ======================== 2 failed, 78 passed in 45.56s ========================= 1644: ##[error]Process completed with exit code 1.

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CI Failure Feedback 🧐

Action: test (==3.0.0a10, 3.10)

Failed stage: run tests [❌]

Failed test name: test_stl_libcpp

Failure summary: The action failed due to two test failures: test_minimal in tests/test_code_generator_minimal.py failed with an AssertionError. The specific assertion that failed was checking the return code of a subprocess call to build extensions using Cython. test_stl_libcpp in tests/test_code_generator_stllibcpp.py failed with an AttributeError. The error occurred because an EncodedString object did not have the expected attribute base_type.

Relevant error logs: 1: ##[group]Operating System 2: Ubuntu ... 647: tests/test_code_generator_stllibcpp.py F [ 16%] 648: tests/test_cython_build_process.py .. [ 18%] 649: tests/test_decl_resolver.py .......................... [ 51%] 650: tests/test_full_library.py . [ 52%] 651: tests/test_main.py .. [ 55%] 652: tests/test_pxd_parser.py .......................... [ 87%] 653: tests/test_types.py ..... [ 93%] 654: tests/test_utils.py ..... [100%] 655: =================================== FAILURES =================================== ... 702: import sys 703: tempdir = tempfile.mkdtemp() 704: if debug: 705: print("\n") 706: print("tempdir=", tempdir) 707: print("\n") 708: for source_file in source_files: 709: if source_file[-4:] != ".pyx" and source_file[-4:] != ".cpp": 710: raise NameError("Expected pyx and/or cpp files as source files for compilation.") ... 746: print("-" * 70) 747: print("\n") 748: assert ( 749: > subprocess.Popen( 750: "%s setup.py build_ext --force --inplace" % sys.executable, shell=True 751: ).wait() 752: == 0 753: ) 754: E AssertionError 755: /home/runner/work/autowrap/autowrap/autowrap/Utils.py:133: AssertionError ... 906: def __set__(self, bool m_bool): 907: self.inst.get().m_bool = (<bool>m_bool) 908: def __get__(self): 909: cdef bool _r = self.inst.get().m_bool 910: py_result = <bool>_r 911: return py_result 912: property m_const: 913: def __set__(self, int m_const): 914: raise AttributeError("Cannot set constant") 915: def __get__(self): 916: cdef int _r = self.inst.get().m_const 917: py_result = <int>_r 918: return py_result 919: property m_constdef: 920: def __set__(self, int m_constdef): 921: raise AttributeError("Cannot set constant") ... 1222: return py_result 1223: def __getitem__(self, index ): 1224: """ 1225: __getitem__(self, index: int ) -> int 1226: """ 1227: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1228: cdef index _idx = (<size_t>index) 1229: if _idx >= self.inst.get().size(): 1230: raise IndexError("invalid index %d" % _idx) ... 1417: def __irshift__(Minimal self, Minimal other not None): 1418: cdef _Minimal * this = self.inst.get() 1419: cdef _Minimal * that = other.inst.get() 1420: _irshift(this, that) 1421: return self 1422: def __richcmp__(self, other, op): 1423: if op not in (2,): 1424: op_str = {0: '<', 2: '==', 4: '>', 1: '<=', 3: '!=', 5: '>='}[op] 1425: raise NotImplementedError("Comparison operator %s not implemented" % op_str) 1426: if not isinstance(other, Minimal): 1427: raise NotImplementedError("Comparison currently only allowed with objects of the same type. Use isinstance and define yourself.") ... 1450: run_static_extra_arg = __static_Minimal_run_static_extra_arg 1451: Autowrap has wrapped 1 classes, 52 methods and 1 enums 1452: running build_ext 1453: [1/1] Cythonizing minimal_wrapper.pyx 1454: ----------------------------- Captured stderr call ----------------------------- 1455: WARNING: '.' not a valid package name; please use only .-separated package names in setup.py 1456: /opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/site-packages/Cython/Compiler/Main.py:346: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/tmp33uoyhg_/minimal_wrapper.pyx 1457: tree = Parsing.p_module(s, pxd, full_module_name) 1458: Error compiling Cython file: ... 1487: self._build_extensions_serial() 1488: File "/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/site-packages/setuptools/_distutils/command/build_ext.py", line 492, in _build_extensions_serial 1489: self.build_extension(ext) 1490: File "/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/site-packages/Cython/Distutils/build_ext.py", line 122, in build_extension 1491: new_ext = cythonize( 1492: File "/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/site-packages/Cython/Build/Dependencies.py", line 1117, in cythonize 1493: cythonize_one(*args) 1494: File "/opt/hostedtoolcache/Python/3.10.15/x64/lib/python3.10/site-packages/Cython/Build/Dependencies.py", line 1284, in cythonize_one 1495: raise CompileError(None, pyx_file) 1496: Cython.Compiler.Errors.CompileError: minimal_wrapper.pyx ... 1587: self = <autowrap.ConversionProvider.ConverterRegistry object at 0x7f80b4d1f400> 1588: cpp_type = 'index' 1589: def get(self, cpp_type: CppType) -> TypeConverterBase: 1590: """ 1591: Gets a conversion provider that inherits from TypeConverterBase and matches both cpp_type.base_type 1592: and the matches function from the successfully looked-up TypeConverter 1593: :param cpp_type: CppType 1594: :return: TypeConverterBase 1595: :except: NameError 1596: """ 1597: > rv = [conv for conv in self.lookup[cpp_type.base_type] if conv.matches(cpp_type)] 1598: E AttributeError: 'EncodedString' object has no attribute 'base_type' 1599: /home/runner/work/autowrap/autowrap/autowrap/ConversionProvider.py:2209: AttributeError ... 1636: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[IntWrapper,int] process_8_map (['int in_'])' 1637: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_9_map (['libcpp_map[int,IntWrapper] & in_'])' 1638: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[int,IntWrapper] process_10_map (['int in_'])' 1639: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: shared_ptr[const IntWrapper] process_11_const ([])' 1640: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_12_map (['libcpp_map[libcpp_string,IntWrapper] & in_'])' 1641: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_13_map (['libcpp_map[IntWrapper,libcpp_vector[int]] & in_'])' 1642: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_14_map (['libcpp_map[IntWrapper,IntVecWrapper] & in_'])' 1643: =========================== short test summary info ============================ 1644: FAILED tests/test_code_generator_minimal.py::test_minimal - AssertionError 1645: FAILED tests/test_code_generator_stllibcpp.py::test_stl_libcpp - AttributeError: 'EncodedString' object has no attribute 'base_type' 1646: =================== 2 failed, 78 passed in 63.17s (0:01:03) ==================== 1647: ##[error]Process completed with exit code 1.

---

✨ CI feedback usage guide:

---

The CI feedback tool (/checks) automatically triggers when a PR has a failed check.
The tool analyzes the failed checks and provides several feedbacks:

• Failed stage
• Failed test name
• Failure summary
• Relevant error logs

In addition to being automatically triggered, the tool can also be invoked manually by commenting on a PR:

/checks "https://github.com/{repo_name}/actions/runs/{run_number}/job/{job_number}"

where {repo_name} is the name of the repository, {run_number} is the run number of the failed check, and {job_number} is the job number of the failed check.

Configuration options

• enable_auto_checks_feedback - if set to true, the tool will automatically provide feedback when a check is failed. Default is true.
• excluded_checks_list - a list of checks to exclude from the feedback, for example: ["check1", "check2"]. Default is an empty list.
• enable_help_text - if set to true, the tool will provide a help message with the feedback. Default is true.
• persistent_comment - if set to true, the tool will overwrite a previous checks comment with the new feedback. Default is true.
• final_update_message - if persistent_comment is true and updating a previous checks message, the tool will also create a new message: "Persistent checks updated to latest commit". Default is true.

See more information about the checks tool in the docs.

[qodo-merge-pro]

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CI Failure Feedback 🧐

Action: test (>0.29.21, 3.7)

Failed stage: run tests [❌]

Failed test name: test_stl_libcpp

Failure summary: The action failed due to two test failures: test_minimal in tests/test_code_generator_minimal.py failed with an AssertionError. The specific assertion failure is not detailed in the log. test_stl_libcpp in tests/test_code_generator_stllibcpp.py failed with an AttributeError. The error occurred because an EncodedString object was accessed with a non-existent attribute base_type.

Relevant error logs: 1: ##[group]Operating System 2: Ubuntu ... 665: tests/test_code_generator_stllibcpp.py F [ 16%] 666: tests/test_cython_build_process.py .. [ 18%] 667: tests/test_decl_resolver.py .......................... [ 51%] 668: tests/test_full_library.py . [ 52%] 669: tests/test_main.py .. [ 55%] 670: tests/test_pxd_parser.py .......................... [ 87%] 671: tests/test_types.py ..... [ 93%] 672: tests/test_utils.py ..... [100%] 673: =================================== FAILURES =================================== ... 720: import sys 721: tempdir = tempfile.mkdtemp() 722: if debug: 723: print("\n") 724: print("tempdir=", tempdir) 725: print("\n") 726: for source_file in source_files: 727: if source_file[-4:] != ".pyx" and source_file[-4:] != ".cpp": 728: raise NameError("Expected pyx and/or cpp files as source files for compilation.") ... 764: print("-" * 70) 765: print("\n") 766: assert ( 767: subprocess.Popen( 768: "%s setup.py build_ext --force --inplace" % sys.executable, shell=True 769: ).wait() 770: > == 0 771: ) 772: E AssertionError 773: /home/runner/work/autowrap/autowrap/autowrap/Utils.py:136: AssertionError ... 924: def __set__(self, bool m_bool): 925: self.inst.get().m_bool = (<bool>m_bool) 926: def __get__(self): 927: cdef bool _r = self.inst.get().m_bool 928: py_result = <bool>_r 929: return py_result 930: property m_const: 931: def __set__(self, int m_const): 932: raise AttributeError("Cannot set constant") 933: def __get__(self): 934: cdef int _r = self.inst.get().m_const 935: py_result = <int>_r 936: return py_result 937: property m_constdef: 938: def __set__(self, int m_constdef): 939: raise AttributeError("Cannot set constant") ... 1240: return py_result 1241: def __getitem__(self, index ): 1242: """ 1243: __getitem__(self, index: int ) -> int 1244: """ 1245: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1246: cdef index _idx = (<size_t>index) 1247: if _idx >= self.inst.get().size(): 1248: raise IndexError("invalid index %d" % _idx) ... 1435: def __irshift__(Minimal self, Minimal other not None): 1436: cdef _Minimal * this = self.inst.get() 1437: cdef _Minimal * that = other.inst.get() 1438: _irshift(this, that) 1439: return self 1440: def __richcmp__(self, other, op): 1441: if op not in (2,): 1442: op_str = {0: '<', 2: '==', 4: '>', 1: '<=', 3: '!=', 5: '>='}[op] 1443: raise NotImplementedError("Comparison operator %s not implemented" % op_str) 1444: if not isinstance(other, Minimal): 1445: raise NotImplementedError("Comparison currently only allowed with objects of the same type. Use isinstance and define yourself.") ... 1467: run_static = __static_Minimal_run_static 1468: run_static_extra_arg = __static_Minimal_run_static_extra_arg 1469: Autowrap has wrapped 1 classes, 52 methods and 1 enums 1470: running build_ext 1471: [1/1] Cythonizing minimal_wrapper.pyx 1472: ----------------------------- Captured stderr call ----------------------------- 1473: /opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/tmpi1hc3q4j/minimal_wrapper.pyx 1474: tree = Parsing.p_module(s, pxd, full_module_name) 1475: Error compiling Cython file: ... 1500: self._build_extensions_serial() 1501: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build_ext.py", line 474, in _build_extensions_serial 1502: self.build_extension(ext) 1503: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Distutils/build_ext.py", line 131, in build_extension 1504: ext,force=self.force, quiet=self.verbose == 0, **options 1505: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Build/Dependencies.py", line 1154, in cythonize 1506: cythonize_one(*args) 1507: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Build/Dependencies.py", line 1321, in cythonize_one 1508: raise CompileError(None, pyx_file) 1509: Cython.Compiler.Errors.CompileError: minimal_wrapper.pyx ... 1600: self = <autowrap.ConversionProvider.ConverterRegistry object at 0x7fb6c72be290> 1601: cpp_type = 'index' 1602: def get(self, cpp_type: CppType) -> TypeConverterBase: 1603: """ 1604: Gets a conversion provider that inherits from TypeConverterBase and matches both cpp_type.base_type 1605: and the matches function from the successfully looked-up TypeConverter 1606: :param cpp_type: CppType 1607: :return: TypeConverterBase 1608: :except: NameError 1609: """ 1610: > rv = [conv for conv in self.lookup[cpp_type.base_type] if conv.matches(cpp_type)] 1611: E AttributeError: 'EncodedString' object has no attribute 'base_type' 1612: /home/runner/work/autowrap/autowrap/autowrap/ConversionProvider.py:2209: AttributeError ... 1649: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[IntWrapper,int] process_8_map (['int in_'])' 1650: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_9_map (['libcpp_map[int,IntWrapper] & in_'])' 1651: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[int,IntWrapper] process_10_map (['int in_'])' 1652: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: shared_ptr[const IntWrapper] process_11_const ([])' 1653: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_12_map (['libcpp_map[libcpp_string,IntWrapper] & in_'])' 1654: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_13_map (['libcpp_map[IntWrapper,libcpp_vector[int]] & in_'])' 1655: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_14_map (['libcpp_map[IntWrapper,IntVecWrapper] & in_'])' 1656: =========================== short test summary info ============================ 1657: FAILED tests/test_code_generator_minimal.py::test_minimal - AssertionError 1658: FAILED tests/test_code_generator_stllibcpp.py::test_stl_libcpp - AttributeError: 'EncodedString' object has no attribute 'base_type' 1659: =================== 2 failed, 78 passed in 64.77s (0:01:04) ==================== 1660: ##[error]Process completed with exit code 1.

---

✨ CI feedback usage guide:

---

The CI feedback tool (/checks) automatically triggers when a PR has a failed check.
The tool analyzes the failed checks and provides several feedbacks:

• Failed stage
• Failed test name
• Failure summary
• Relevant error logs

In addition to being automatically triggered, the tool can also be invoked manually by commenting on a PR:

/checks "https://github.com/{repo_name}/actions/runs/{run_number}/job/{job_number}"

where {repo_name} is the name of the repository, {run_number} is the run number of the failed check, and {job_number} is the job number of the failed check.

Configuration options

• enable_auto_checks_feedback - if set to true, the tool will automatically provide feedback when a check is failed. Default is true.
• excluded_checks_list - a list of checks to exclude from the feedback, for example: ["check1", "check2"]. Default is an empty list.
• enable_help_text - if set to true, the tool will provide a help message with the feedback. Default is true.
• persistent_comment - if set to true, the tool will overwrite a previous checks comment with the new feedback. Default is true.
• final_update_message - if persistent_comment is true and updating a previous checks message, the tool will also create a new message: "Persistent checks updated to latest commit". Default is true.

See more information about the checks tool in the docs.

[qodo-merge-pro]

PR-Agent was enabled for this repository. To continue using it, please link your git user with your CodiumAI identity here.

CI Failure Feedback 🧐

Action: test (==3.0.0a10, 3.7)

Failed stage: run tests [❌]

Failed test name: test_stl_libcpp

Failure summary: The action failed due to two test failures: test_minimal in tests/test_code_generator_minimal.py failed with an AssertionError. The specific assertion that failed was checking the return code of a subprocess call to build extensions, which did not return 0 as expected. test_stl_libcpp in tests/test_code_generator_stllibcpp.py failed with an AttributeError. The error occurred because an EncodedString object was accessed for a non-existent attribute base_type.

Relevant error logs: 1: ##[group]Operating System 2: Ubuntu ... 665: tests/test_code_generator_stllibcpp.py F [ 16%] 666: tests/test_cython_build_process.py .. [ 18%] 667: tests/test_decl_resolver.py .......................... [ 51%] 668: tests/test_full_library.py . [ 52%] 669: tests/test_main.py .. [ 55%] 670: tests/test_pxd_parser.py .......................... [ 87%] 671: tests/test_types.py ..... [ 93%] 672: tests/test_utils.py ..... [100%] 673: =================================== FAILURES =================================== ... 720: import sys 721: tempdir = tempfile.mkdtemp() 722: if debug: 723: print("\n") 724: print("tempdir=", tempdir) 725: print("\n") 726: for source_file in source_files: 727: if source_file[-4:] != ".pyx" and source_file[-4:] != ".cpp": 728: raise NameError("Expected pyx and/or cpp files as source files for compilation.") ... 764: print("-" * 70) 765: print("\n") 766: assert ( 767: subprocess.Popen( 768: "%s setup.py build_ext --force --inplace" % sys.executable, shell=True 769: ).wait() 770: > == 0 771: ) 772: E AssertionError 773: /home/runner/work/autowrap/autowrap/autowrap/Utils.py:136: AssertionError ... 924: def __set__(self, bool m_bool): 925: self.inst.get().m_bool = (<bool>m_bool) 926: def __get__(self): 927: cdef bool _r = self.inst.get().m_bool 928: py_result = <bool>_r 929: return py_result 930: property m_const: 931: def __set__(self, int m_const): 932: raise AttributeError("Cannot set constant") 933: def __get__(self): 934: cdef int _r = self.inst.get().m_const 935: py_result = <int>_r 936: return py_result 937: property m_constdef: 938: def __set__(self, int m_constdef): 939: raise AttributeError("Cannot set constant") ... 1240: return py_result 1241: def __getitem__(self, index ): 1242: """ 1243: __getitem__(self, index: int ) -> int 1244: """ 1245: assert isinstance(index, int) and index >= 0, 'arg index wrong type' 1246: cdef index _idx = (<size_t>index) 1247: if _idx >= self.inst.get().size(): 1248: raise IndexError("invalid index %d" % _idx) ... 1435: def __irshift__(Minimal self, Minimal other not None): 1436: cdef _Minimal * this = self.inst.get() 1437: cdef _Minimal * that = other.inst.get() 1438: _irshift(this, that) 1439: return self 1440: def __richcmp__(self, other, op): 1441: if op not in (2,): 1442: op_str = {0: '<', 2: '==', 4: '>', 1: '<=', 3: '!=', 5: '>='}[op] 1443: raise NotImplementedError("Comparison operator %s not implemented" % op_str) 1444: if not isinstance(other, Minimal): 1445: raise NotImplementedError("Comparison currently only allowed with objects of the same type. Use isinstance and define yourself.") ... 1467: run_static = __static_Minimal_run_static 1468: run_static_extra_arg = __static_Minimal_run_static_extra_arg 1469: Autowrap has wrapped 1 classes, 52 methods and 1 enums 1470: running build_ext 1471: [1/1] Cythonizing minimal_wrapper.pyx 1472: ----------------------------- Captured stderr call ----------------------------- 1473: /opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Compiler/Main.py:346: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/tmppcub55q0/minimal_wrapper.pyx 1474: tree = Parsing.p_module(s, pxd, full_module_name) 1475: Error compiling Cython file: ... 1500: self._build_extensions_serial() 1501: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/distutils/command/build_ext.py", line 474, in _build_extensions_serial 1502: self.build_extension(ext) 1503: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Distutils/build_ext.py", line 123, in build_extension 1504: ext,force=self.force, quiet=self.verbose == 0, **options 1505: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Build/Dependencies.py", line 1117, in cythonize 1506: cythonize_one(*args) 1507: File "/opt/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/Cython/Build/Dependencies.py", line 1284, in cythonize_one 1508: raise CompileError(None, pyx_file) 1509: Cython.Compiler.Errors.CompileError: minimal_wrapper.pyx ... 1600: self = <autowrap.ConversionProvider.ConverterRegistry object at 0x7fca222666d0> 1601: cpp_type = 'index' 1602: def get(self, cpp_type: CppType) -> TypeConverterBase: 1603: """ 1604: Gets a conversion provider that inherits from TypeConverterBase and matches both cpp_type.base_type 1605: and the matches function from the successfully looked-up TypeConverter 1606: :param cpp_type: CppType 1607: :return: TypeConverterBase 1608: :except: NameError 1609: """ 1610: > rv = [conv for conv in self.lookup[cpp_type.base_type] if conv.matches(cpp_type)] 1611: E AttributeError: 'EncodedString' object has no attribute 'base_type' 1612: /home/runner/work/autowrap/autowrap/autowrap/ConversionProvider.py:2209: AttributeError ... 1649: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[IntWrapper,int] process_8_map (['int in_'])' 1650: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_9_map (['libcpp_map[int,IntWrapper] & in_'])' 1651: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: libcpp_map[int,IntWrapper] process_10_map (['int in_'])' 1652: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: shared_ptr[const IntWrapper] process_11_const ([])' 1653: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_12_map (['libcpp_map[libcpp_string,IntWrapper] & in_'])' 1654: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_13_map (['libcpp_map[IntWrapper,libcpp_vector[int]] & in_'])' 1655: INFO autowrap:DeclResolver.py:603 resolve method decl: 'CppMethodOrFunctionDecl: int process_14_map (['libcpp_map[IntWrapper,IntVecWrapper] & in_'])' 1656: =========================== short test summary info ============================ 1657: FAILED tests/test_code_generator_minimal.py::test_minimal - AssertionError 1658: FAILED tests/test_code_generator_stllibcpp.py::test_stl_libcpp - AttributeError: 'EncodedString' object has no attribute 'base_type' 1659: =================== 2 failed, 78 passed in 62.57s (0:01:02) ==================== 1660: ##[error]Process completed with exit code 1.

---

✨ CI feedback usage guide:

---

The CI feedback tool (/checks) automatically triggers when a PR has a failed check.
The tool analyzes the failed checks and provides several feedbacks:

• Failed stage
• Failed test name
• Failure summary
• Relevant error logs

In addition to being automatically triggered, the tool can also be invoked manually by commenting on a PR:

/checks "https://github.com/{repo_name}/actions/runs/{run_number}/job/{job_number}"

where {repo_name} is the name of the repository, {run_number} is the run number of the failed check, and {job_number} is the job number of the failed check.

Configuration options

• enable_auto_checks_feedback - if set to true, the tool will automatically provide feedback when a check is failed. Default is true.
• excluded_checks_list - a list of checks to exclude from the feedback, for example: ["check1", "check2"]. Default is an empty list.
• enable_help_text - if set to true, the tool will provide a help message with the feedback. Default is true.
• persistent_comment - if set to true, the tool will overwrite a previous checks comment with the new feedback. Default is true.
• final_update_message - if persistent_comment is true and updating a previous checks message, the tool will also create a new message: "Persistent checks updated to latest commit". Default is true.

See more information about the checks tool in the docs.