{2023.06}[GCC/12.3.0] BCFtools V1.18 #415

TopRichard · 2024-07-01T08:34:48Z

BCFtools V1.18 is available on SAGA:
lic --> MIT/Expat license or the GNU General Public License (GPL)

1 out of 8 required modules missing:

* BCFtools/1.18-GCC-12.3.0 (BCFtools-1.18-GCC-12.3.0.eb)

nessi-bot · 2024-07-01T08:34:53Z

Instance AWS-MC-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/skylake_avx512, x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10, nessi-2023.06-cl

nessi-bot · 2024-07-01T08:34:53Z

Instance eX3-NESSI is configured to build for:

architectures: x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-swl-deb10, nessi-2023.06-swl-deb11, nessi-2023.06-cl

nessi-bot · 2024-07-01T08:34:53Z

Instance Fram-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/broadwell
repositories: nessi-2023.06-swl-deb11, nessi-2023.06-cl, nessi-2023.06-swl-deb10

nessi-bot · 2024-07-01T08:34:57Z

Instance Saga-NESSI is configured to build for:

architectures: x86_64/intel/skylake_avx512, x86_64/intel/broadwell, x86_64/generic
repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

TopRichard · 2024-07-01T08:35:07Z

bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake
bot: build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic

nessi-bot · 2024-07-01T08:35:10Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- submitted job 222001, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)

nessi-bot · 2024-07-01T08:35:10Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- submitted job 13646, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- submitted job 13647, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:35:10Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:35:10Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- submitted job 11886979, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- submitted job 11886980, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:35:14Z

New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.07/pr_415/13646

date	job status	comment
Jul 01 08:35:13 UTC 2024	submitted	job id `13646` awaits release by job manager
Jul 01 08:35:28 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:40:33 UTC 2024	running	job `13646` is running
Jul 01 09:05:44 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-13646.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1719824224.tar.gz` size: 1 MiB (1182538 bytes) entries: 69 modules under 2023.06/software/linux/x86_64/generic/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/x86_64/generic/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/x86_64/generic no other files in tarball
Jul 01 09:05:44 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-13646.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:12 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1719824224.tar.gz` to S3 bucket succeeded
Jul 01 10:05:14 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-generic-1719824224.tar.gz` downloaded to Stratum-0
Jul 01 10:05:40 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/508 to approve ingest
Jul 01 10:09:09 AM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-generic-1719824224.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/508
Jul 01 10:12:31 AM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-generic-1719824224.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/generic/`

nessi-bot · 2024-07-01T08:35:17Z

New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb11 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.07/pr_415/222001

date	job status	comment
Jul 01 08:35:16 AM UTC 2024	submitted	job id `222001` awaits release by job manager
Jul 01 08:35:50 AM UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:36:52 AM UTC 2024	running	job `222001` is running
Jul 01 08:56:14 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-222001.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1719823632.tar.gz` size: 1 MiB (1224915 bytes) entries: 69 modules under 2023.06/software/linux/aarch64/generic/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/aarch64/generic/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/aarch64/generic no other files in tarball
Jul 01 08:56:14 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-222001.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:10 AM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1719823632.tar.gz` to S3 bucket succeeded
Jul 01 10:05:07 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-aarch64-generic-1719823632.tar.gz` downloaded to Stratum-0
Jul 01 10:05:32 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/506 to approve ingest
Jul 01 10:09:00 AM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-aarch64-generic-1719823632.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/506
Jul 01 10:10:27 AM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-aarch64-generic-1719823632.tar.gz` successfully ingested at `2023.06/software/linux/aarch64/generic/`

nessi-bot · 2024-07-01T08:35:18Z

New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.07/pr_415/13647

date	job status	comment
Jul 01 08:35:17 UTC 2024	submitted	job id `13647` awaits release by job manager
Jul 01 08:35:26 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:40:32 UTC 2024	running	job `13647` is running
Jul 01 09:06:45 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-13647.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1719824201.tar.gz` size: 1 MiB (1218293 bytes) entries: 69 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
Jul 01 09:06:45 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-13647.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:32 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1719824201.tar.gz` to S3 bucket succeeded
Jul 01 10:05:10 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1719824201.tar.gz` downloaded to Stratum-0
Jul 01 10:05:36 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/507 to approve ingest
Jul 01 10:09:05 AM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1719824201.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/507
Jul 01 10:11:39 AM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1719824201.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/amd/zen2/`

nessi-bot · 2024-07-01T08:36:26Z

New job on instance Saga-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.07/pr_415/11886979

date	job status	comment
Jul 01 08:36:25 AM UTC 2024	submitted	job id `11886979` awaits release by job manager
Jul 01 08:37:04 AM UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:38:09 AM UTC 2024	running	job `11886979` is running
Jul 01 09:22:56 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11886979.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-broadwell-1719825021.tar.gz` size: 1 MiB (1219344 bytes) entries: 69 modules under 2023.06/software/linux/x86_64/intel/broadwell/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/x86_64/intel/broadwell/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/x86_64/intel/broadwell no other files in tarball
Jul 01 09:22:56 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11886979.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:33 AM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-broadwell-1719825021.tar.gz` to S3 bucket succeeded
Jul 01 10:05:18 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1719825021.tar.gz` downloaded to Stratum-0
Jul 01 10:05:49 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/509 to approve ingest
Jul 01 10:09:13 AM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1719825021.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/509
Jul 01 10:13:25 AM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1719825021.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/broadwell/`

nessi-bot · 2024-07-01T08:37:38Z

New job on instance Saga-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.07/pr_415/11886980

date	job status	comment
Jul 01 08:37:37 AM UTC 2024	submitted	job id `11886980` awaits release by job manager
Jul 01 08:38:07 AM UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:39:13 AM UTC 2024	running	job `11886980` is running
Jul 01 09:26:01 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11886980.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719825036.tar.gz` size: 1 MiB (1218745 bytes) entries: 69 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Jul 01 09:26:01 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11886980.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:54 AM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719825036.tar.gz` to S3 bucket succeeded
Jul 01 10:05:26 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719825036.tar.gz` downloaded to Stratum-0
Jul 01 10:05:57 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/511 to approve ingest
Jul 01 10:09:21 AM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719825036.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/511
Jul 01 10:14:21 AM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719825036.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/skylake_avx512/`

TopRichard · 2024-07-01T08:38:53Z

bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake

nessi-bot · 2024-07-01T08:38:56Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- submitted job 13648, for details & status see {2023.06}[GCC/12.3.0] BCFtools V1.18 #415 (comment)

nessi-bot · 2024-07-01T08:38:56Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:38:56Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:38:57Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted

nessi-bot · 2024-07-01T08:39:00Z

New job on instance AWS-MC-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.07/pr_415/13648

date	job status	comment
Jul 01 08:38:59 UTC 2024	submitted	job id `13648` awaits release by job manager
Jul 01 08:39:30 UTC 2024	released	job awaits launch by Slurm scheduler
Jul 01 08:44:43 UTC 2024	running	job `13648` is running
Jul 01 09:04:41 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-13648.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719824168.tar.gz` size: 1 MiB (1219221 bytes) entries: 69 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BCFtools/1.18-GCC-12.3.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `BCFtools/1.18-GCC-12.3.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Jul 01 09:04:41 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-13648.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Jul 01 10:03:51 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719824168.tar.gz` to S3 bucket succeeded
Jul 01 10:05:22 AM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719824168.tar.gz` downloaded to Stratum-0
Jul 01 10:05:53 AM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/510 to approve ingest
Jul 01 10:09:18 AM UTC 2024	rejected	👎 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1719824168.tar.gz` rejected, see PR https://github.com/NorESSI/2024-staging/pull/510

TopRichard · 2024-07-01T10:00:59Z

Checklist before starting deployment (setting bot:deploy label):

Check whether builds for all required architectures succeed (SUCCESS message + reasonably sized tarball)
Check if the PR is up-to-date with the target branch nessi.no-2023.06 in the repository (if not what are the differences)
Assess if all requested changes are sound (checking files changed on GitHub.com)
Verify that all easyconfig/s being built are included with the EB version used (if not why not)
Review changes (if any) needed to get the build(s) succeed (common changes for all architectures, changes for a single architecture, changes because of build environment specifics, etc.)

TopRichard · 2024-07-01T10:23:07Z

Target architectures

x86_64-intel-broadwell
x86_64-intel-skylake_avx512
x86_64-amd-zen2
x86_64-generic
aarch64-generic

Checklist for deployment/ingestion

Check if the SPDX license identifier is provided
at least one tarball for each architecture has been uploaded
at least one tarball for each architecture has been staged
for each architecture one and only one tarball has been approved
for each architecture one and only one tarball was ingested
all tests in the CI for the ingested tarballs have succeeded (rerun failed tests ~ 10 mins after last ingest)
has the package become available via CernVM-FS for all architectures ingested (for lmod cache updates pay attention to timestamp of files)

command & log

command

cd /cvmfs/pilot.nessi.no/versions/2023.06/software/linux ; 
ls -l \
      x86_64/{generic,amd/zen2,intel/[bsc]*}/{software,modules/all}/BCFtools/1.18-GCC-12.3.0* \
      aarch64/generic/{software,modules/all}/BCFtools/1.18-GCC-12.3.0*

log

-rw-r--r--. 1 cvmfs cvmfs 1431 Jul  1 08:46 aarch64/generic/modules/all/BCFtools/1.18-GCC-12.3.0.lua
-rw-rw-r--. 1 cvmfs cvmfs 1431 Jul  1 08:55 x86_64/amd/zen2/modules/all/BCFtools/1.18-GCC-12.3.0.lua
-rw-rw-r--. 1 cvmfs cvmfs 1430 Jul  1 08:55 x86_64/generic/modules/all/BCFtools/1.18-GCC-12.3.0.lua
-rw-rw-r--. 1 cvmfs cvmfs 1438 Jul  1 09:09 x86_64/intel/broadwell/modules/all/BCFtools/1.18-GCC-12.3.0.lua
-rw-rw-r--. 1 cvmfs cvmfs 1443 Jul  1 09:09 x86_64/intel/skylake_avx512/modules/all/BCFtools/1.18-GCC-12.3.0.lua

aarch64/generic/software/BCFtools/1.18-GCC-12.3.0:
total 18
dr-xr-xr-x. 2 cvmfs cvmfs 4096 Jul  1 08:46 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:46 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:46 libexec
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:46 share

x86_64/amd/zen2/software/BCFtools/1.18-GCC-12.3.0:
total 18
dr-xr-xr-x. 2 cvmfs cvmfs 4096 Jul  1 08:55 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 libexec
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 share

x86_64/generic/software/BCFtools/1.18-GCC-12.3.0:
total 18
dr-xr-xr-x. 2 cvmfs cvmfs 4096 Jul  1 08:55 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 libexec
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 08:55 share

x86_64/intel/broadwell/software/BCFtools/1.18-GCC-12.3.0:
total 18
dr-xr-xr-x. 2 cvmfs cvmfs 4096 Jul  1 09:09 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 libexec
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 share

x86_64/intel/skylake_avx512/software/BCFtools/1.18-GCC-12.3.0:
total 18
dr-xr-xr-x. 2 cvmfs cvmfs 4096 Jul  1 09:09 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 libexec
dr-xr-xr-x. 3 cvmfs cvmfs 4096 Jul  1 09:09 share

justadejavu

Okay

{2023.06}[GCC/12.3.0] BCFtools V1.18

53980a0

TopRichard added the NESSI/2023.06 label Jul 1, 2024

TopRichard added the bot:deploy label Jul 1, 2024

TopRichard added the ingested label Jul 1, 2024

TopRichard requested a review from justadejavu July 1, 2024 10:46

justadejavu approved these changes Jul 1, 2024

View reviewed changes

TopRichard merged commit b79d5a6 into NorESSI:nessi.no-2023.06 Jul 1, 2024
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{2023.06}[GCC/12.3.0] BCFtools V1.18 #415

{2023.06}[GCC/12.3.0] BCFtools V1.18 #415

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{2023.06}[GCC/12.3.0] BCFtools V1.18 #415

{2023.06}[GCC/12.3.0] BCFtools V1.18 #415

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