{2023.06}[system] Nextflow v23.10.0 #376

trz42 · 2024-05-26T15:25:14Z

Adding Nextflow to NESSI/2023.06

SPDX license identifier: Apache-2.0

Missing packages:

1 out of 3 required modules missing:

* Nextflow/23.10.0 (Nextflow-23.10.0.eb)

nessi-bot · 2024-05-26T15:25:17Z

Instance eX3-NESSI is configured to build for:

architectures: x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

nessi-bot · 2024-05-26T15:25:18Z

Instance AWS-MC-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/skylake_avx512, x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-swl-deb11, nessi-2023.06-cl, nessi-2023.06-swl-deb10

nessi-bot · 2024-05-26T15:25:18Z

Instance Fram-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/broadwell
repositories: nessi-2023.06-swl-deb10, nessi-2023.06-cl, nessi-2023.06-swl-deb11

nessi-bot · 2024-05-26T15:25:18Z

Instance Saga-NESSI is configured to build for:

architectures: x86_64/intel/skylake_avx512, x86_64/intel/broadwell, x86_64/generic
repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

trz42 · 2024-05-26T15:25:24Z

bot: build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake
bot: build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic

nessi-bot · 2024-05-26T15:25:26Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- submitted job 209487, for details & status see {2023.06}[system] Nextflow v23.10.0 #376 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-26T15:25:26Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- submitted job 11488, for details & status see {2023.06}[system] Nextflow v23.10.0 #376 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- submitted job 11489, for details & status see {2023.06}[system] Nextflow v23.10.0 #376 (comment)

nessi-bot · 2024-05-26T15:25:26Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- submitted job 5806739, for details & status see {2023.06}[system] Nextflow v23.10.0 #376 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-26T15:25:27Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- submitted job 11664547, for details & status see {2023.06}[system] Nextflow v23.10.0 #376 (comment)
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-26T15:25:31Z

New job on instance Fram-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_376/5806739

date	job status	comment
May 26 15:25:30 UTC 2024	submitted	job id `5806739` awaits release by job manager
May 26 15:25:33 UTC 2024	released	job awaits launch by Slurm scheduler
May 26 15:27:35 UTC 2024	running	job `5806739` is running
May 26 15:57:10 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-5806739.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716737820.tar.gz` size: 101 MiB (106086806 bytes) entries: 18 modules under 2023.06/software/linux/x86_64/intel/broadwell/modules/all `Nextflow/23.10.0.lua` software under 2023.06/software/linux/x86_64/intel/broadwell/software `Nextflow/23.10.0` other under 2023.06/software/linux/x86_64/intel/broadwell no other files in tarball
May 26 15:57:10 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-5806739.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 26 16:40:21 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716737820.tar.gz` to S3 bucket succeeded
May 26 04:48:24 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716737820.tar.gz` downloaded to Stratum-0
May 26 04:48:41 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/379 to approve ingest
May 26 04:52:35 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716737820.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/379
May 26 04:55:56 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716737820.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/broadwell/`

nessi-bot · 2024-05-26T15:25:32Z

New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_376/11488

date	job status	comment
May 26 15:25:31 UTC 2024	submitted	job id `11488` awaits release by job manager
May 26 15:25:54 UTC 2024	released	job awaits launch by Slurm scheduler
May 26 15:31:15 UTC 2024	running	job `11488` is running
May 26 15:59:27 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11488.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1716738031.tar.gz` size: 101 MiB (106087575 bytes) entries: 18 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `Nextflow/23.10.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `Nextflow/23.10.0` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
May 26 15:59:27 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11488.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 26 16:40:22 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1716738031.tar.gz` to S3 bucket succeeded
May 26 04:48:18 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1716738031.tar.gz` downloaded to Stratum-0
May 26 04:48:35 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/377 to approve ingest
May 26 04:52:30 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1716738031.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/377
May 26 04:54:24 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1716738031.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/amd/zen2/`

nessi-bot · 2024-05-26T15:25:32Z

New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb10 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_376/209487

date	job status	comment
May 26 03:25:31 PM UTC 2024	submitted	job id `209487` awaits release by job manager
May 26 03:26:13 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 26 03:27:18 PM UTC 2024	running	job `209487` is running
May 26 04:11:13 PM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-209487.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1716737799.tar.gz` size: 101 MiB (106087263 bytes) entries: 18 modules under 2023.06/software/linux/aarch64/generic/modules/all `Nextflow/23.10.0.lua` software under 2023.06/software/linux/aarch64/generic/software `Nextflow/23.10.0` other under 2023.06/software/linux/aarch64/generic no other files in tarball
May 26 04:11:13 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-209487.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 26 04:40:19 PM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1716737799.tar.gz` to S3 bucket succeeded
May 26 04:48:15 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-aarch64-generic-1716737799.tar.gz` downloaded to Stratum-0
May 26 04:48:32 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/376 to approve ingest
May 26 04:52:27 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-aarch64-generic-1716737799.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/376
May 26 04:53:33 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-aarch64-generic-1716737799.tar.gz` successfully ingested at `2023.06/software/linux/aarch64/generic/`

nessi-bot · 2024-05-26T15:25:36Z

New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_376/11489

date	job status	comment
May 26 15:25:35 UTC 2024	submitted	job id `11489` awaits release by job manager
May 26 15:25:56 UTC 2024	released	job awaits launch by Slurm scheduler
May 26 15:31:18 UTC 2024	running	job `11489` is running
May 26 16:03:44 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11489.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1716738047.tar.gz` size: 101 MiB (106087154 bytes) entries: 18 modules under 2023.06/software/linux/x86_64/generic/modules/all `Nextflow/23.10.0.lua` software under 2023.06/software/linux/x86_64/generic/software `Nextflow/23.10.0` other under 2023.06/software/linux/x86_64/generic no other files in tarball
May 26 16:03:44 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11489.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 26 16:40:45 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1716738047.tar.gz` to S3 bucket succeeded
May 26 04:48:21 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-generic-1716738047.tar.gz` downloaded to Stratum-0
May 26 04:48:38 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/378 to approve ingest
May 26 04:52:33 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-generic-1716738047.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/378
May 26 04:55:12 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-generic-1716738047.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/generic/`

nessi-bot · 2024-05-26T15:25:43Z

New job on instance Saga-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_376/11664547

date	job status	comment
May 26 03:25:42 PM UTC 2024	submitted	job id `11664547` awaits release by job manager
May 26 03:26:42 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 26 03:27:50 PM UTC 2024	running	job `11664547` is running
May 26 04:04:33 PM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11664547.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716737873.tar.gz` size: 101 MiB (106087559 bytes) entries: 18 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `Nextflow/23.10.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `Nextflow/23.10.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
May 26 04:04:33 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11664547.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
May 26 04:40:26 PM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716737873.tar.gz` to S3 bucket succeeded
May 26 04:48:27 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716737873.tar.gz` downloaded to Stratum-0
May 26 04:48:44 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/380 to approve ingest
May 26 04:52:38 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716737873.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/380
May 26 04:56:39 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716737873.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/skylake_avx512/`

trz42 · 2024-05-26T16:37:59Z

Checklist before starting deployment (setting bot:deploy label):

Check if the SPDX license identifier is provided
Check whether builds for all required architectures succeed (SUCCESS message + reasonably sized tarball)
Check if the PR is up-to-date with the target branch nessi.no-2023.06 in the repository (if not what are the differences)
Assess if all requested changes are sound (checking files changed on GitHub.com)
Verify that all easyconfig/s being built are included with the EB version used (if not why not)
Review changes (if any) needed to get the build(s) succeed (common changes for all architectures, changes for a single architecture, changes because of build environment specifics, etc.)

trz42 · 2024-05-26T16:49:30Z

Target architectures

x86_64-intel-broadwell
x86_64-intel-skylake_avx512
x86_64-amd-zen2
x86_64-generic
aarch64-generic

Checklist for deployment/ingestion

at least one tarball for each architecture has been uploaded
at least one tarball for each architecture has been staged
for each staged tarball was a PR for approval/rejection opened
for each architecture one and only one tarball has been approved
for each architecture one and only one tarball was ingested
all tests in the CI have succeeded (rerun failed tests ~ 10 mins after last ingest)
has the package become available via CernVM-FS for all architectures ingested (for lmod cache updates pay attention to timestamp of files)

command & log

command

BASE_DIR=/cvmfs/pilot.nessi.no/versions/2023.06/software/linux \
ARCHS=() \
ARCHS+=("aarch64/generic") ; \
ARCHS+=("x86_64/generic") ; \
ARCHS+=("x86_64/amd/zen2") ; \
ARCHS+=("x86_64/intel/broadwell") ; \
ARCHS+=("x86_64/intel/skylake_avx512") ; \
for arch in "${ARCHS[@]}"; do \
ls -l \
${BASE_DIR}/${arch}/{software,modules/all}/Nextflow/23.10.0* ; \
done

log - BEFORE ingestion

ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/aarch64/generic/software/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/aarch64/generic/modules/all/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/generic/software/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/generic/modules/all/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/amd/zen2/software/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/amd/zen2/modules/all/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/broadwell/software/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/broadwell/modules/all/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/software/Nextflow/23.10.0*': No such file or directory
ls: cannot access '/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all/Nextflow/23.10.0*': No such file or directory

log - AFTER ingestion

-rw-r--r-- 1 cvmfs cvmfs  998 May 26 17:36 /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/aarch64/generic/modules/all/Nextflow/23.10.0.lua

/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/aarch64/generic/software/Nextflow/23.10.0:
total 9
dr-xr-xr-x 2 cvmfs cvmfs 4096 May 26 17:35 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 May 26 17:36 easybuild
-rw-rw-r-- 1 cvmfs cvmfs  997 May 26 17:40 /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/generic/modules/all/Nextflow/23.10.0.lua

/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/generic/software/Nextflow/23.10.0:
total 9
dr-xr-xr-x 2 cvmfs cvmfs 4096 May 26 17:40 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 May 26 17:40 easybuild
-rw-rw-r-- 1 cvmfs cvmfs  998 May 26 17:40 /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/amd/zen2/modules/all/Nextflow/23.10.0.lua

/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/amd/zen2/software/Nextflow/23.10.0:
total 9
dr-xr-xr-x 2 cvmfs cvmfs 4096 May 26 17:39 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 May 26 17:40 easybuild
-rw-rw-r-- 1 cvmfs cvmfs 1005 May 26 17:36 /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/broadwell/modules/all/Nextflow/23.10.0.lua

/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/broadwell/software/Nextflow/23.10.0:
total 9
dr-xr-xr-x 2 cvmfs cvmfs 4096 May 26 17:36 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 May 26 17:36 easybuild
-rw-rw-r-- 1 cvmfs cvmfs 1010 May 26 17:37 /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all/Nextflow/23.10.0.lua

/cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/skylake_avx512/software/Nextflow/23.10.0:
total 9
dr-xr-xr-x 2 cvmfs cvmfs 4096 May 26 17:37 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 May 26 17:37 easybuild

poksumdo

Easy one.

{2023.06}[system] Nextflow v23.10.0

ca2f97f

trz42 added NESSI/2023.06 sync-with-EESSI labels May 26, 2024

trz42 added the bot:deploy label May 26, 2024

trz42 added the ingested label May 26, 2024

poksumdo approved these changes May 26, 2024

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poksumdo merged commit 61a3a75 into NorESSI:nessi.no-2023.06 May 26, 2024
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{2023.06}[system] Nextflow v23.10.0 #376

{2023.06}[system] Nextflow v23.10.0 #376

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{2023.06}[system] Nextflow v23.10.0 #376

{2023.06}[system] Nextflow v23.10.0 #376

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