{2023.06}[gompi/2022b] prokka V1.14.5 #373

TopRichard · 2024-05-24T12:14:48Z

prokka is found on Saga

Lic --> GPLv2

8 out of 49 required modules missing:

* tbl2asn/20230713-linux64 (tbl2asn-20230713-linux64.eb)
* XML-LibXML/2.0208-GCCcore-12.2.0 (XML-LibXML-2.0208-GCCcore-12.2.0.eb)
* parallel/20230722-GCCcore-12.2.0 (parallel-20230722-GCCcore-12.2.0.eb)
* BioPerl/1.7.8-GCCcore-12.2.0 (BioPerl-1.7.8-GCCcore-12.2.0.eb)
* Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0 (Bio-SearchIO-hmmer-1.7.3-GCC-12.2.0.eb)
* LMDB/0.9.29-GCCcore-12.2.0 (LMDB-0.9.29-GCCcore-12.2.0.eb)
* BLAST+/2.14.0-gompi-2022b (BLAST+-2.14.0-gompi-2022b.eb)
* prokka/1.14.5-gompi-2022b (prokka-1.14.5-gompi-2022b.eb)

nessi-bot · 2024-05-24T12:14:52Z

Instance AWS-MC-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/skylake_avx512, x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-swl-deb11, nessi-2023.06-cl, nessi-2023.06-swl-deb10

nessi-bot · 2024-05-24T12:14:52Z

Instance eX3-NESSI is configured to build for:

architectures: x86_64/amd/zen2, aarch64/generic
repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

nessi-bot · 2024-05-24T12:14:52Z

Instance Saga-NESSI is configured to build for:

architectures: x86_64/intel/skylake_avx512, x86_64/intel/broadwell, x86_64/generic
repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

nessi-bot · 2024-05-24T12:14:52Z

Instance Fram-NESSI is configured to build for:

architectures: x86_64/generic, x86_64/intel/broadwell
repositories: nessi-2023.06-swl-deb10, nessi-2023.06-cl, nessi-2023.06-swl-deb11

TopRichard · 2024-05-24T12:15:13Z

bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake
bot: build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic

nessi-bot · 2024-05-24T12:15:16Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- submitted job 11374, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- submitted job 11375, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:15:16Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:15:16Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- submitted job 205009, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)

nessi-bot · 2024-05-24T12:15:16Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- submitted job 11653212, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- submitted job 11653215, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:15:20Z

New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_373/11374

date	job status	comment
May 24 12:15:19 UTC 2024	submitted	job id `11374` awaits release by job manager
May 24 12:15:33 UTC 2024	released	job awaits launch by Slurm scheduler
May 24 13:23:41 UTC 2024	running	job `11374` is running
May 24 14:01:36 UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-11374.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1716557916.tar.gz` size: 3 MiB (3196629 bytes) entries: 1475 modules under 2023.06/software/linux/x86_64/generic/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/x86_64/generic/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/x86_64/generic no other files in tarball
May 24 14:01:36 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11374.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

nessi-bot · 2024-05-24T12:15:23Z

New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb11 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_373/205009

date	job status	comment
May 24 12:15:22 PM UTC 2024	submitted	job id `205009` awaits release by job manager
May 24 12:16:13 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 12:17:15 PM UTC 2024	running	job `205009` is running
May 24 01:03:19 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-205009.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1716553908.tar.gz` size: 3 MiB (3195002 bytes) entries: 1475 modules under 2023.06/software/linux/aarch64/generic/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/aarch64/generic/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/aarch64/generic no other files in tarball
May 24 01:03:19 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-205009.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

nessi-bot · 2024-05-24T12:15:24Z

New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_373/11375
Failure:

(err: 'build failed (first 300 chars): Failed to copy file /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/amd/zen2/software/EasyBuild/4.9.1/lib/python3.11/site-packages/easybuild/easyblocks/generic/perlmodule.py to /tmp/eb-uuik48dl/eb-pd_5q4f8/reprod_20240524122819_812/easyblocks/perlmodule.py: [Errno 13] Permission denied:')

date	job status	comment
May 24 12:15:23 UTC 2024	submitted	job id `11375` awaits release by job manager
May 24 12:15:31 UTC 2024	released	job awaits launch by Slurm scheduler
May 24 12:16:35 UTC 2024	running	job `11375` is running
May 24 12:50:08 UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-11375.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1716553873.tar.gz` size: 3 MiB (3198491 bytes) entries: 1475 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
May 24 12:50:08 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11375.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

nessi-bot · 2024-05-24T12:15:43Z

New job on instance Saga-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_373/11653212

build failed (first 300 chars): Failed to copy file /cvmfs/pilot.nessi.no/versions/2023.06/software/linux/x86_64/intel/broadwell/software/EasyBuild/4.9.1/lib/python3.11/site-packages/easybuild/easyblocks/generic/perlmodule.py to /tmp/eb-dju8face/eb-iu63g79e/reprod_20240524143916_812/easyblocks/perlmodule.py: [Errno 13] Permission  (took 16 mins 57 secs)

date	job status	comment
May 24 12:15:42 PM UTC 2024	submitted	job id `11653212` awaits release by job manager
May 24 12:16:32 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 12:17:36 PM UTC 2024	running	job `11653212` is running
May 24 01:51:43 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-11653212.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-broadwell-1716555461.tar.gz` size: 3 MiB (3202317 bytes) entries: 1475 modules under 2023.06/software/linux/x86_64/intel/broadwell/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/x86_64/intel/broadwell/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/x86_64/intel/broadwell no other files in tarball
May 24 01:51:43 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11653212.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

nessi-bot · 2024-05-24T12:16:07Z

New job on instance Saga-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_373/11653215

date	job status	comment
May 24 12:16:06 PM UTC 2024	submitted	job id `11653215` awaits release by job manager
May 24 12:16:34 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 12:17:38 PM UTC 2024	running	job `11653215` is running
May 24 01:16:55 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-11653215.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716555011.tar.gz` size: 3 MiB (3204329 bytes) entries: 1475 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
May 24 01:16:55 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11653215.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

TopRichard · 2024-05-24T12:53:48Z

bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2

TopRichard · 2024-05-24T12:55:40Z

bot: build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:zen2

nessi-bot · 2024-05-24T12:55:43Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:55:43Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- submitted job 205022, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)

nessi-bot · 2024-05-24T12:55:44Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:55:44Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T12:55:47Z

New job on instance eX3-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb10 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_373/205022

date	job status	comment
May 24 12:55:46 PM UTC 2024	submitted	job id `205022` awaits release by job manager
May 24 12:56:01 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 12:57:05 PM UTC 2024	running	job `205022` is running
May 24 12:58:07 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-205022.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.
May 24 12:58:07 PM UTC 2024	test result	😁 FAILURE (click triangle for details) Reason Failed for unknown reason Details ✅ job output file `slurm-205022.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

TopRichard · 2024-05-24T13:00:02Z

bot: build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:zen2

nessi-bot · 2024-05-24T13:00:06Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- submitted job 205024, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)

nessi-bot · 2024-05-24T13:00:06Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:00:06Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:00:06Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2
handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:00:09Z

New job on instance eX3-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_373/205024

date	job status	comment
May 24 01:00:08 PM UTC 2024	submitted	job id `205024` awaits release by job manager
May 24 01:00:11 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 01:01:16 PM UTC 2024	running	job `205024` is running
May 24 01:02:18 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-205024.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.
May 24 01:02:18 PM UTC 2024	test result	😁 FAILURE (click triangle for details) Reason Failed for unknown reason Details ✅ job output file `slurm-205024.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

TopRichard · 2024-05-24T13:03:30Z

bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2

nessi-bot · 2024-05-24T13:03:32Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- submitted job 11376, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)

nessi-bot · 2024-05-24T13:03:32Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:03:32Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:03:33Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb10 arch:zen2 from TopRichard
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb10 architecture:zen2 resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:03:36Z

New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb10 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_373/11376

date	job status	comment
May 24 13:03:35 UTC 2024	submitted	job id `11376` awaits release by job manager
May 24 13:04:12 UTC 2024	released	job awaits launch by Slurm scheduler
May 24 13:05:14 UTC 2024	running	job `11376` is running
May 24 13:35:06 UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-11376.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1716556612.tar.gz` size: 3 MiB (3196427 bytes) entries: 1475 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
May 24 13:35:06 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11376.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

TopRichard · 2024-05-24T13:10:54Z

bot: build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:aarch64/generic

nessi-bot · 2024-05-24T13:10:57Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:10:57Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- submitted job 205025, for details & status see {2023.06}[gompi/2022b] prokka V1.14.5 #373 (comment)

nessi-bot · 2024-05-24T13:10:57Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:10:57Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:eX3 repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from TopRichard
- expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
handling command build instance:eX3 repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-05-24T13:11:01Z

New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb10 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_373/205025

date	job status	comment
May 24 01:11:00 PM UTC 2024	submitted	job id `205025` awaits release by job manager
May 24 01:11:23 PM UTC 2024	released	job awaits launch by Slurm scheduler
May 24 01:12:26 PM UTC 2024	running	job `205025` is running
May 24 01:57:50 PM UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-205025.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1716557161.tar.gz` size: 3 MiB (3189007 bytes) entries: 1475 modules under 2023.06/software/linux/aarch64/generic/modules/all `BioPerl/1.7.8-GCCcore-12.2.0.lua` `XML-LibXML/2.0208-GCCcore-12.2.0.lua` software under 2023.06/software/linux/aarch64/generic/software `BioPerl/1.7.8-GCCcore-12.2.0` `XML-LibXML/2.0208-GCCcore-12.2.0` other under 2023.06/software/linux/aarch64/generic no other files in tarball
May 24 01:57:50 PM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-205025.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

{2023.06}[gompi/2022b] prokka V1.14.5

10c9e9b

TopRichard added the NESSI/2023.06 label May 24, 2024

{2023.06}[gompi/2022b] prokka V1.14.5 #373

Are you sure you want to change the base?

{2023.06}[gompi/2022b] prokka V1.14.5 #373

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