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Update JCB-GDAS for Aerosol DA (#1389) #7079

Update JCB-GDAS for Aerosol DA (#1389)

Update JCB-GDAS for Aerosol DA (#1389) #7079

name: Unit Tests Within NCEP Global-Workflow
on: [push, pull_request]
jobs:
ctests:
runs-on: ubuntu-22.04
name: Run Unit Tests inside global-workflow with ctest
steps:
- name: Install pip dependencies
run: |
pip install --upgrade pip
pip install pycodestyle
pip install netCDF4
pip install xarray
- name: Install other dependencies
run: |
sudo mkdir -p /work/noaa # to trick workflow into thinking this is RDHPCS Orion
- name: Checkout wxflow
uses: actions/checkout@v3
with:
repository: NOAA-EMC/wxflow
ref: develop
path: wxflow
- name: Install wxflow
run: |
cd wxflow
pip install .
- name: Checkout workflow
uses: actions/checkout@v3
with:
repository: NOAA-EMC/global-workflow
ref: develop
path: global-workflow
- name: Checkout GDASApp
uses: actions/checkout@v3
with:
path: global-workflow/sorc/gdas.cd
- name: Install ecBuild
run: |
git clone https://github.com/ecmwf/ecbuild.git ecbuild
cd ecbuild
git checkout 3.6.1
mkdir bootstrap
cd bootstrap
../bin/ecbuild ..
sudo make install
- name: Configure with cmake
run: |
mkdir $GITHUB_WORKSPACE/global-workflow/sorc/gdas.cd/build && cd $GITHUB_WORKSPACE/global-workflow/sorc/gdas.cd/build
cmake -DBUILD_GDASBUNDLE=OFF -DWORKFLOW_TESTS=ON $GITHUB_WORKSPACE/global-workflow/sorc/gdas.cd/
- name: Build GDASApp
run: |
cd $GITHUB_WORKSPACE/global-workflow/sorc/gdas.cd/build
make
- name: Run ctest
run: |
cd $GITHUB_WORKSPACE/global-workflow/sorc/gdas.cd/build
ctest --output-on-failure