Add External Events #981
Workflow file for this run
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name: Database Migrations Check PR | |
on: | |
pull_request: | |
paths: | |
- "deployment/hasura/migrations/**" | |
- "deployment/postgres-init-db/sql/**" | |
- ".github/workflows/pgcmp.yml" | |
- ".github/workflows/scripts/compareDatabases*" | |
push: | |
paths: | |
- "deployment/hasura/migrations/**" | |
- "deployment/postgres-init-db/sql/**" | |
- ".github/workflows/pgcmp.yml" | |
- ".github/workflows/scripts/compareDatabases*" | |
branches: | |
- develop | |
- dev-[0-9]+.[0-9]+.[0-9]+ | |
tags: | |
- v* | |
workflow_dispatch: | |
env: | |
AERIE_USERNAME: "${{secrets.AERIE_USERNAME}}" | |
AERIE_PASSWORD: "${{secrets.AERIE_PASSWORD}}" | |
HASURA_GRAPHQL_ADMIN_SECRET: "${{secrets.HASURA_GRAPHQL_ADMIN_SECRET}}" | |
HASURA_GRAPHQL_JWT_SECRET: "${{secrets.HASURA_GRAPHQL_JWT_SECRET}}" | |
POSTGRES_USER: "${{secrets.POSTGRES_USER}}" | |
POSTGRES_PASSWORD: "${{secrets.POSTGRES_PASSWORD}}" | |
GATEWAY_USERNAME: "${{secrets.GATEWAY_USERNAME}}" | |
GATEWAY_PASSWORD: "${{secrets.GATEWAY_PASSWORD}}" | |
MERLIN_USERNAME: "${{secrets.MERLIN_USERNAME}}" | |
MERLIN_PASSWORD: "${{secrets.MERLIN_PASSWORD}}" | |
SCHEDULER_USERNAME: "${{secrets.SCHEDULER_USERNAME}}" | |
SCHEDULER_PASSWORD: "${{secrets.SCHEDULER_PASSWORD}}" | |
SEQUENCING_USERNAME: "${{secrets.SEQUENCING_USERNAME}}" | |
SEQUENCING_PASSWORD: "${{secrets.SEQUENCING_PASSWORD}}" | |
jobs: | |
dump-db-base: | |
runs-on: ubuntu-latest | |
environment: e2e-test | |
steps: | |
- name: Checkout v2.8.0 | |
uses: actions/checkout@v4 | |
with: | |
ref: "v2.8.0" | |
- name: Clone PGCMP | |
uses: actions/checkout@v4 | |
with: | |
repository: NASA-AMMOS/pgcmp | |
path: pgcmp | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Setup Postgres Client (psql) | |
# ubuntu-latest does not currently have psql-16 in its apt library, so we cannot just run | |
# sudo apt update && sudo apt-get install --yes postgresql-client-16 | |
# Current instructions are from https://www.postgresql.org/download/linux/ubuntu/ | |
run: | | |
sudo apt update | |
sudo apt install curl ca-certificates | |
sudo install -d /usr/share/postgresql-common/pgdg | |
sudo curl -o /usr/share/postgresql-common/pgdg/apt.postgresql.org.asc --fail https://www.postgresql.org/media/keys/ACCC4CF8.asc | |
sudo sh -c 'echo "deb [signed-by=/usr/share/postgresql-common/pgdg/apt.postgresql.org.asc] https://apt.postgresql.org/pub/repos/apt $(lsb_release -cs)-pgdg main" > /etc/apt/sources.list.d/pgdg.list' | |
sudo apt update | |
sudo apt -y install postgresql-client-16 | |
- name: Setup Hasura CLI | |
run: sudo curl -L https://github.com/hasura/graphql-engine/raw/stable/cli/get.sh | bash | |
- name: Start Postgres | |
run: | | |
sed -i 's/postgres:14.8/postgres:16.4/' docker-compose.yml | |
docker compose up -d postgres hasura | |
docker images | |
docker ps -a | |
- name: Sleep for 1 Minute | |
run: sleep 60s | |
shell: bash | |
- name: Dump v2.8.0 Database | |
run: | | |
mkdir pgdumpV2_8_0 | |
PGURI=postgres://"${AERIE_USERNAME}":"${AERIE_PASSWORD}"@localhost:5432/aerie \ | |
PGCMPOUTPUT=./pgdumpV2_8_0/AerieV2_8_0 \ | |
PGCLABEL=AerieV2_8_0 \ | |
PGBINDIR=/usr/bin \ | |
./pgcmp/pgcmp-dump | |
shell: bash | |
- name: Share Database Dump | |
uses: actions/upload-artifact@v4 | |
with: | |
name: v2_8_0-db-dump | |
path: pgdumpV2_8_0 | |
retention-days: 1 | |
- name: Checkout Latest | |
uses: actions/checkout@v4 | |
- name: Restart Hasura | |
run: | | |
docker compose down | |
docker compose up -d postgres hasura | |
docker images | |
docker ps -a | |
- name: Sleep for 30 seconds | |
run: sleep 30s | |
shell: bash | |
- name: Migrate Base to Latest | |
run: | | |
cd deployment | |
cat << EOF > .env | |
AERIE_USERNAME=${AERIE_USERNAME} | |
AERIE_PASSWORD=${AERIE_PASSWORD} | |
EOF | |
python -m pip install -r requirements.txt | |
python aerie_db_migration.py --apply --all | |
cd .. | |
- name: Clone PGCMP | |
uses: actions/checkout@v4 | |
with: | |
repository: NASA-AMMOS/pgcmp | |
path: pgcmp | |
- name: Dump Migrated Database | |
run: | | |
mkdir pgdumpmigrated | |
PGURI=postgres://"${AERIE_USERNAME}":"${AERIE_PASSWORD}"@localhost:5432/aerie \ | |
PGCMPOUTPUT=./pgdumpmigrated/AerieMigratedUp \ | |
PGCLABEL=AerieMigratedUp \ | |
PGBINDIR=/usr/bin \ | |
./pgcmp/pgcmp-dump | |
shell: bash | |
- name: Share Database Dump | |
uses: actions/upload-artifact@v4 | |
with: | |
name: migrated-db-dump | |
path: pgdumpmigrated | |
retention-days: 1 | |
- name: Print Logs for Services | |
if: success() || failure() | |
run: docker compose logs -t | |
- name: Stop Postgres and Hasura | |
run: | | |
docker ps -a | |
docker compose down | |
docker ps -a | |
- name: Prune Volumes | |
run: docker volume prune --force | |
dump-current: | |
runs-on: ubuntu-latest | |
environment: e2e-test | |
steps: | |
- name: Checkout Repo | |
uses: actions/checkout@v4 | |
- name: Setup Postgres Client (psql) | |
# ubuntu-latest does not currently have psql-16 in its apt library, so we cannot just run | |
# sudo apt update && sudo apt-get install --yes postgresql-client-16 | |
# Current instructions are from https://www.postgresql.org/download/linux/ubuntu/ | |
run: | | |
sudo apt update | |
sudo apt install curl ca-certificates | |
sudo install -d /usr/share/postgresql-common/pgdg | |
sudo curl -o /usr/share/postgresql-common/pgdg/apt.postgresql.org.asc --fail https://www.postgresql.org/media/keys/ACCC4CF8.asc | |
sudo sh -c 'echo "deb [signed-by=/usr/share/postgresql-common/pgdg/apt.postgresql.org.asc] https://apt.postgresql.org/pub/repos/apt $(lsb_release -cs)-pgdg main" > /etc/apt/sources.list.d/pgdg.list' | |
sudo apt update | |
sudo apt -y install postgresql-client-16 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.10" | |
- name: Setup Hasura CLI | |
run: sudo curl -L https://github.com/hasura/graphql-engine/raw/stable/cli/get.sh | bash | |
- name: Start Postgres and Hasura | |
run: | | |
docker compose up -d postgres hasura | |
docker images | |
docker ps -a | |
- name: Sleep for 1 Minute | |
run: sleep 60s | |
shell: bash | |
- name: Clone PGCMP | |
uses: actions/checkout@v4 | |
with: | |
repository: NASA-AMMOS/pgcmp | |
path: pgcmp | |
- name: Dump Current Database | |
run: | | |
mkdir pgdumpcurrent | |
PGURI=postgres://"${AERIE_USERNAME}":"${AERIE_PASSWORD}"@localhost:5432/aerie \ | |
PGCMPOUTPUT=./pgdumpcurrent/AerieCurrent \ | |
PGCLABEL=AerieCurrent \ | |
PGBINDIR=/usr/bin \ | |
./pgcmp/pgcmp-dump | |
shell: bash | |
- name: Share Database Dump | |
uses: actions/upload-artifact@v4 | |
with: | |
name: current-sql-db-dump | |
path: pgdumpcurrent | |
retention-days: 1 | |
- name: Migrate Latest to Base | |
run: | | |
cd deployment | |
cat << EOF > .env | |
AERIE_USERNAME=${AERIE_USERNAME} | |
AERIE_PASSWORD=${AERIE_PASSWORD} | |
EOF | |
python -m pip install -r requirements.txt | |
python aerie_db_migration.py --revert --all | |
cd .. | |
- name: Dump Migrated Database | |
run: | | |
mkdir pgdumpmigrateddown | |
PGURI=postgres://"${AERIE_USERNAME}":"${AERIE_PASSWORD}"@localhost:5432/aerie \ | |
PGCMPOUTPUT=./pgdumpmigrateddown/AerieMigratedDown \ | |
PGCLABEL=AerieMigratedDown \ | |
PGBINDIR=/usr/bin \ | |
./pgcmp/pgcmp-dump | |
shell: bash | |
- name: Share Database Dump | |
uses: actions/upload-artifact@v4 | |
with: | |
name: migrated-down-db-dump | |
path: pgdumpmigrateddown | |
retention-days: 1 | |
- name: Print Logs for Services | |
run: docker compose logs -t | |
- name: Stop Postgres and Hasura | |
run: | | |
docker ps -a | |
docker compose down | |
docker ps -a | |
- name: Prune Volumes | |
run: docker volume prune --force | |
pgcmp-up: | |
needs: [dump-db-base, dump-current] | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Repo | |
uses: actions/checkout@v4 | |
- name: Clone PGCMP | |
uses: actions/checkout@v4 | |
with: | |
repository: NASA-AMMOS/pgcmp | |
path: pgcmp | |
- name: Setup Postgres Client (psql) | |
# ubuntu-latest does not currently have psql-16 in its apt library, so we cannot just run | |
# sudo apt update && sudo apt-get install --yes postgresql-client-16 | |
# Current instructions are from https://www.postgresql.org/download/linux/ubuntu/ | |
run: | | |
sudo apt update | |
sudo apt install curl ca-certificates | |
sudo install -d /usr/share/postgresql-common/pgdg | |
sudo curl -o /usr/share/postgresql-common/pgdg/apt.postgresql.org.asc --fail https://www.postgresql.org/media/keys/ACCC4CF8.asc | |
sudo sh -c 'echo "deb [signed-by=/usr/share/postgresql-common/pgdg/apt.postgresql.org.asc] https://apt.postgresql.org/pub/repos/apt $(lsb_release -cs)-pgdg main" > /etc/apt/sources.list.d/pgdg.list' | |
sudo apt update | |
sudo apt -y install postgresql-client-16 | |
- name: Start Postgres | |
run: docker run -d -p 5432:5432 -e POSTGRES_HOST_AUTH_METHOD=trust --name=postgres postgres:16.4 | |
- name: Sleep for 5 Seconds | |
run: sleep 5s | |
shell: bash | |
- name: Download Shared Dumps | |
uses: actions/download-artifact@v4 | |
with: | |
name: migrated-db-dump | |
path: pgcmp/pgdumpmigrated | |
- uses: actions/download-artifact@v4 | |
with: | |
name: current-sql-db-dump | |
path: pgcmp/pgdumpcurrent | |
- name: Compare Databases | |
id: dbcmp | |
run: | | |
cp ./.github/scripts/explanations pgcmp | |
cp ./.github/scripts/compareDatabasesUp.sh pgcmp/compareDatabases.sh | |
cd pgcmp | |
./compareDatabases.sh | |
shell: bash | |
- name: Upload Invalid | |
if: ${{ failure() && steps.dbcmp.conclusion == 'failure' }} | |
uses: actions/upload-artifact@v4 | |
with: | |
name: pgcmpresultsup | |
path: "**/results/" | |
- name: Print Logs for Services | |
if: always() | |
run: docker logs -t postgres | |
- name: Stop Postgres | |
run: | | |
docker ps -a | |
docker stop postgres | |
docker ps -a | |
- name: Prune Volumes | |
run: docker volume prune --force | |
pgcmp-down: | |
needs: [dump-db-base, dump-current] | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Repo | |
uses: actions/checkout@v4 | |
- name: Clone PGCMP | |
uses: actions/checkout@v4 | |
with: | |
repository: NASA-AMMOS/pgcmp | |
path: pgcmp | |
- name: Setup Postgres Client (psql) | |
# ubuntu-latest does not currently have psql-16 in its apt library, so we cannot just run | |
# sudo apt update && sudo apt-get install --yes postgresql-client-16 | |
# Current instructions are from https://www.postgresql.org/download/linux/ubuntu/ | |
run: | | |
sudo apt update | |
sudo apt install curl ca-certificates | |
sudo install -d /usr/share/postgresql-common/pgdg | |
sudo curl -o /usr/share/postgresql-common/pgdg/apt.postgresql.org.asc --fail https://www.postgresql.org/media/keys/ACCC4CF8.asc | |
sudo sh -c 'echo "deb [signed-by=/usr/share/postgresql-common/pgdg/apt.postgresql.org.asc] https://apt.postgresql.org/pub/repos/apt $(lsb_release -cs)-pgdg main" > /etc/apt/sources.list.d/pgdg.list' | |
sudo apt update | |
sudo apt -y install postgresql-client-16 | |
- name: Start Postgres | |
run: docker run -d -p 5432:5432 -e POSTGRES_HOST_AUTH_METHOD=trust --name=postgres postgres:16.4 | |
- name: Sleep for 5 Seconds | |
run: sleep 5s | |
shell: bash | |
- name: Download Shared Dumps | |
uses: actions/download-artifact@v4 | |
with: | |
name: v2_8_0-db-dump | |
path: pgcmp/pgdumpV2_8_0 | |
- uses: actions/download-artifact@v4 | |
with: | |
name: migrated-down-db-dump | |
path: pgcmp/pgdumpmigrateddown | |
- name: Compare Databases | |
id: dbcmp | |
run: | | |
cp ./.github/scripts/explanations pgcmp | |
cp ./.github/scripts/compareDatabasesDown.sh pgcmp/compareDatabases.sh | |
cd pgcmp | |
./compareDatabases.sh | |
shell: bash | |
- name: Upload Invalid | |
if: ${{ failure() && steps.dbcmp.conclusion == 'failure' }} | |
uses: actions/upload-artifact@v4 | |
with: | |
name: pgcmpresultsdown | |
path: "**/results/" | |
- name: Print Logs for Services | |
if: always() | |
run: docker logs -t postgres | |
- name: Stop Postgres | |
run: | | |
docker ps -a | |
docker stop postgres | |
docker ps -a | |
- name: Prune Volumes | |
run: docker volume prune --force |