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Welcome to the SeuratViewer wiki!
SeuratViewer is an R-Shiny based website for viewing single cell RNA-Seq data analysed using Seurat (version 3). The pipeline for this is available here
The input for this website is the Seurat object saved as an RData/RDS object.SeuratViewer reads in the expression data, sample data, feature annotation, dimensionality reduction/ clustering, and marker gene information and enables users to view and interact with their single-cell RNAseq data. The website also provides additional functionalities such as performing differential expression analysis and trajectory analysis, downloading plots and looking at ligand-receptor interactions.
