Code

Multi-tile-output#289

Code

Closed

fraserwg wants to merge 116 commits intoMITgcm:masterMITgcm/xmitgcm:masterfrom fraserwg:approach3fraserwg/xmitgcm:approach3Copy head branch name to clipboard

+11,288-1,017

Commits

Commits on Nov 8, 2017

• test refactor (MITgcm#54)

  rabernat

  authored
  0d8cfbf

Commits on Nov 13, 2017

• fixes MITgcm#56 (MITgcm#57)

  rabernat

  authored
  06405fa

Commits on Dec 14, 2017

• Fix llc chunking (MITgcm#60)

  Show description for 15da54b
  rabernat

  authored
  15da54b

• fix time encoding (MITgcm#61)

  rabernat

  authored
  5954626

Commits on Jan 17, 2018

• Update examples.rst (MITgcm#65)

  

  ifenty

  authored and

  rabernat

  committed
  45d02b5

Commits on Feb 5, 2018

• Added functionality to read PTRtave files (MITgcm#63)

  Show description for d81f7dc
  

  Takaya Uchida

  authored and

  rabernat

  committed
  d81f7dc

Commits on Feb 21, 2018

• Adding .stickler.yml (MITgcm#70)

  

  stickler-ci

  authored and

  rabernat

  committed
  42aa2be

Commits on Mar 5, 2018

• Extract version number from git tag (MITgcm#72)

  Show description for 4a2bc59
  

  edoddridge

  authored and

  rabernat

  committed
  4a2bc59

Commits on Apr 6, 2018

• Generalizes _get_all_iternums in order to handle compressed data (MITgcm#77)

  Show description for 298adcb
  

  apatlpo

  authored and

  rabernat

  committed
  298adcb

Commits on Jun 8, 2018

• Cast prefix to list if it isn't already one (MITgcm#79)

  Show description for d8127ce
  

  edoddridge

  authored and

  rabernat

  committed
  d8127ce

Commits on Jun 22, 2018

• fix the problem with testing type of prefix (MITgcm#83)

  Show description for 46f3232
  

  raphaeldussin

  authored and

  rabernat

  committed
  46f3232

Commits on Jul 16, 2018

• extend capabilities of read_raw_data (MITgcm#84)

  Show description for bb1e63c
  

  raphaeldussin

  authored and

  rabernat

  committed
  bb1e63c

Commits on Jul 17, 2018

• update dev history

  raphaeldussin

  committed
  8f17b81

• Bump version: 0.2.1 → 0.2.2

  raphaeldussin

  committed
  a3edf9e

Commits on Jul 30, 2018

• fix for RTD ?

  raphaeldussin

  committed
  727552e

• Merge pull request MITgcm#86 from raphaeldussin/tag_v0.2.2

  Show description for 21e8a89
  raphaeldussin

  authored
  21e8a89

Commits on Aug 7, 2018

• bug fix get llc shape (MITgcm#88)

  

  raphaeldussin

  authored and

  rabernat

  committed
  72feddc

Commits on Aug 10, 2018

• try to fix doc build

  rabernat

  authored
  8a5488d

Commits on Aug 23, 2018

• WIP refactoring of low level functions (MITgcm#87)

  Show description for 4da34ff
  

  raphaeldussin

  authored and

  rabernat

  committed
  4da34ff

Commits on Sep 4, 2018

• add conda instructions

  raphaeldussin

  committed
  39af349

• Merge pull request MITgcm#94 from raphaeldussin/docedits

  Show description for 64c588a
  raphaeldussin

  authored
  64c588a

Commits on Sep 10, 2018

• Add seaice and thsice native output (MITgcm#96)

  Show description for 1cbf6d3
  

  mjlosch

  authored and

  rabernat

  committed
  1cbf6d3

Commits on Sep 14, 2018

• clean refactored read_mds (MITgcm#93)

  Show description for 04223e2
  

  raphaeldussin

  authored and

  rabernat

  committed
  04223e2

Commits on Sep 17, 2018

• refactoring mds_store to include the option to pass extra metadata (MITgcm#97)

  Show description for 86e5003
  

  raphaeldussin

  authored and

  rabernat

  committed
  86e5003

Commits on Sep 22, 2018

• fix token bug (MITgcm#101)

  Show description for 300739e
  rabernat

  authored
  300739e

• added angles to llc grid coords (MITgcm#92)

  Show description for 67bf9bb
  rabernat

  authored
  67bf9bb

Commits on Nov 9, 2018

• Fix bug llc, fixes MITgcm#102 (MITgcm#104)

  Show description for 410af6e
  

  raphaeldussin

  authored and

  rabernat

  committed
  410af6e

Commits on Nov 10, 2018

• added extra grid variables to variables.py

  Show description for 71cb8d5
  timothyas

  committed
  71cb8d5

• subroutines to read extra grid vars

  Show description for 35073cf
  timothyas

  committed
  35073cf

• extra grid vars loaded no matter user prefix

  timothyas

  committed
  589b347

• Small rearrangement, skipping hybrid sigma coordinate output for now.

  timothyas

  committed
  a9c402b

• Fixing style errors.

  stickler-ci

  committed
  f32ad02

• Fixed lines > 79 char long

  timothyas

  committed
  d4b3c3b

• Merge branch 'extra-grid-vars' of github.com:timothyas/xmitgcm into extra-grid-vars

  timothyas

  committed
  e5d0ba1

Commits on Nov 25, 2018

• Remove excess extra_grid_vars functions

  Show description for 0cac299
  timothyas

  committed
  0cac299

• Fixing style errors.

  stickler-ci

  committed
  a2ab37f

Commits on Dec 17, 2018

• Merge pull request MITgcm#110 from timothyas/extra-grid-vars

  Show description for 73fae38
  raphaeldussin

  authored
  73fae38

Commits on Jan 14, 2019

• transfer test data to figshare (MITgcm#115)

  Show description for 4bf2a40
  

  raphaeldussin

  authored and

  rabernat

  committed
  4bf2a40

Commits on Jan 15, 2019

• Read mitgrid files (MITgcm#114)

  Show description for 6aa98ca
  

  raphaeldussin

  authored and

  rabernat

  committed
  6aa98ca

Commits on Jan 22, 2019

• silly bug read grid (MITgcm#117)

  Show description for 274f811
  raphaeldussin

  authored
  274f811

• Fix warnings (MITgcm#113)

  Show description for 008cbc3
  raphaeldussin

  authored
  008cbc3

Commits on Feb 18, 2019

• Write binary files from xmitgcm (MITgcm#118)

  Show description for ddcb898
  raphaeldussin

  authored
  ddcb898

Commits on Mar 18, 2019

• Calculate binary masks from hFac variables (MITgcm#120)

  Show description for 3cac02a
  

  timothyas

  authored and

  rabernat

  committed
  3cac02a

Commits on Mar 26, 2019

• Add try/except for OrderedDict (MITgcm#123)

  

  malmans2

  authored and

  rabernat

  committed
  6464531

Commits on Mar 28, 2019

• add new CI config (MITgcm#125)

  Show description for 4155cda
  

  raphaeldussin

  authored and

  rabernat

  committed
  4155cda

Commits on Apr 30, 2019

• add read grid demo (MITgcm#130)

  raphaeldussin

  authored
  8e949f2

• try fix rtd build (MITgcm#132)

  raphaeldussin

  authored
  bc48c88

• Fix rtd (MITgcm#133)

  Show description for e85a2b8
  raphaeldussin

  authored
  e85a2b8

Commits on May 1, 2019

• Fix rtd (MITgcm#134)

  Show description for eb44671
  raphaeldussin

  authored
  eb44671

• Fix rtd (MITgcm#135)

  Show description for 170645a
  raphaeldussin

  authored
  170645a

Commits on May 2, 2019

• New docs to write binary files (MITgcm#136)

  Show description for d453ce4
  raphaeldussin

  authored
  d453ce4

• fix docstring (MITgcm#137)

  raphaeldussin

  authored
  d951bc7

• Fix docstrings (MITgcm#138)

  Show description for 0e330f2
  raphaeldussin

  authored
  0e330f2

• missing white line (MITgcm#139)

  raphaeldussin

  authored
  140888a

Commits on May 18, 2019

• update links to https (MITgcm#129)

  

  lpmi-13

  authored and

  rabernat

  committed
  ff30a93

Commits on May 20, 2019

• fix for 2d diagnostics llc bug (MITgcm#146)

  Show description for fa46d1d
  rabernat

  authored
  fa46d1d

• also search in grid_dir for avail_diags.log (MITgcm#147)

  Show description for 2cac4bf
  rabernat

  authored
  2cac4bf

• Cleanup for release (MITgcm#150)

  Show description for 264f9c6
  rabernat

  authored
  264f9c6

Commits on Jun 19, 2019

• add llcreader module (MITgcm#152)

  Show description for 98ea1e7
  rabernat

  authored
  98ea1e7

• lighten build requirements

  rabernat

  committed
  5d47c04

• more doc env tweaks

  rabernat

  committed
  b5934f1

• add zarr and fsspec

  rabernat

  committed
  c8b2d05

Commits on Jul 11, 2019

• Release v0.4.0

  rabernat

  committed
  5cc6f69

• re-added bugfix from MITgcm#155 which was accidentally overwritten during the release of 0.4.0

  rabernat

  committed
  d3ecf98

• Release v0.4.1

  rabernat

  committed
  0dce402

Commits on Aug 6, 2019

• add API doc (MITgcm#164)

  rabernat

  authored
  4712763

Commits on Sep 5, 2019

• dask and mmap mutually exclusive (MITgcm#165)

  

  malmans2

  authored and

  rabernat

  committed
  e7243d1

• Change deprecated call of py.test.Raises (MITgcm#167)

  

  aulemahal

  authored and

  rabernat

  committed
  20d8d4f

Commits on Sep 11, 2019

• Fix fsspec keyword arg bug (MITgcm#170)

  Show description for 31cbe08
  rabernat

  authored
  31cbe08

Commits on Sep 27, 2019

• rename repo to MITgcm (MITgcm#172)

  rabernat

  authored
  c276286

Commits on Oct 25, 2019

• Use cache for listing directories (MITgcm#168)

  Show description for f865eab
  rabernat

  authored
  f865eab

• remove old ci stuff (MITgcm#176)

  rabernat

  authored
  95b2cb5

• Read data with level subsets, read namelists. (MITgcm#149)

  Show description for cfe8287
  

  aulemahal

  authored and

  rabernat

  committed
  cfe8287

• Modify datetime decoding (MITgcm#177)

  Show description for 53686ca
  rabernat

  authored
  53686ca

Commits on Nov 13, 2019

• hopefully fix path join bug (MITgcm#181)

  rabernat

  authored
  55555c3

Commits on Nov 22, 2019

• remove extra print statement from open_mdsdataset (MITgcm#183)

  

  cspencerjones

  authored and

  rabernat

  committed
  923bbf3

Commits on Feb 26, 2020

• add mask_override option to llcreader (MITgcm#192)

  rabernat

  authored
  cc84ee3

Commits on Mar 6, 2020

• Python 3.8 compatibility (MITgcm#194)

  Show description for 48c72a9
  

  Takaya Uchida

  and

  Uchida Takaya

  authored
  48c72a9

Commits on Apr 14, 2020

• new combine_by_coords option combine_attrs (MITgcm#200)

  timothyas

  authored
  172ab1b

Commits on Jun 3, 2020

• iter_stop matches last model date (MITgcm#203)

  Show description for 4841b4b
  antonimmo

  authored
  4841b4b

Commits on Jun 4, 2020

• llcreader: get grid info from portal (MITgcm#197)

  Show description for c65bc73
  timothyas

  authored
  c65bc73

Commits on Jun 18, 2020

• add xg and yg to llcreader known_models (MITgcm#208)

  Show description for 79baec6
  rabernat

  authored
  79baec6

Commits on Sep 30, 2020

• Travis to gha (MITgcm#223)

  Show description for 5aba259
  timothyas

  authored
  5aba259

Commits on Oct 12, 2020

• python 2.7 env with old zarr (MITgcm#226)

  Show description for 929fb05
  timothyas

  authored
  929fb05

Commits on Nov 3, 2020

• Skip conflict checks with recent xarray in open_mdsdataset (MITgcm#230)

  aulemahal

  authored
  7968355

Commits on Nov 12, 2020

• add metadata to llcreader dimensions (MITgcm#239)

  rabernat

  authored
  1a2990f

Commits on Nov 13, 2020

• Fix llcreader klevels bug (MITgcm#225)

  Show description for e68b3e5
  rabernat

  authored
  e68b3e5

Commits on Nov 16, 2020

• llcreader + ASTE Release 1 (MITgcm#231)

  Show description for f9e1b57
  timothyas

  authored
  f9e1b57

• feat: IMPLEMENTS CHECKING FOR VARIABLE MATES (MITgcm#237)

  Show description for 46546d1
  fraserwg

  authored
  46546d1

• fixed probable typo for 'coordinate' entry in dimensions dictionary (MITgcm#236)

  Show description for 3c88d45
  ifenty

  authored
  3c88d45

Commits on Nov 20, 2020

• feat: CHECKS ITERATION PARAMETERS WHEN GETTING LLCMODEL DATASETS (MITgcm#240)

  Show description for fba360b
  

  fraserwg

  and

  rabernat

  authored
  fba360b

• added publish workflow (MITgcm#241)

  rabernat

  authored
  dfab5be

• Update ci.yaml

  rabernat

  authored
  6b664ce

Commits on Nov 24, 2020

• Update development.rst (MITgcm#242)

  cspencerjones

  authored
  72f327b

Commits on Dec 3, 2020

• fix tiny typo (MITgcm#245)

  brian-rose

  authored
  843a3ce

Commits on Jan 12, 2021

• add a standard set of ADJ variables (MITgcm#247)

  mjlosch

  authored
  ec8cacf

• fixed mistake with naming of Zl/Zu and k_l/k_u. Now l='lower', u='upper' (MITgcm#250)

  ifenty

  authored
  95c708f

Commits on Jan 19, 2021

• Update xarray master ci (MITgcm#248)

  Show description for fb87e5c
  timothyas

  authored
  fb87e5c

Commits on Jan 21, 2021

• fix variable metadata typos (MITgcm#249)

  Show description for e4d02ef
  

  3 peopleauthored
  e4d02ef

Commits on Feb 11, 2021

• Add pleiades grid path & better grid_path error message (MITgcm#255)

  Show description for e6ee132
  timothyas

  authored
  e6ee132

Commits on Mar 2, 2021

• Cube Sphere support (MITgcm#98)

  Show description for 26fa060
  

  3 peopleauthored
  26fa060

• Update usage.rst (MITgcm#252)

  Show description for 1324448
  rabernat

  authored
  1324448

• Remove unnecessary parts (MITgcm#243)

  rabernat

  authored
  2dea547

Commits on Apr 14, 2021

• try py 3.7?

  timothyas

  committed
  41c10bc

Commits on May 5, 2021

• Merge pull request MITgcm#260 from timothyas/xr_master_ci

  Show description for 3673f59
  timothyas

  authored
  3673f59

Commits on May 17, 2021

• modified open_mdsdataset to add extra_variables (MITgcm#205)

  Show description for e9b2aaa
  

  3 peopleauthored
  e9b2aaa

Commits on May 28, 2021

• fix combine_by_coords (MITgcm#267)

  Show description for 403039b
  AaronDavidSchneider

  authored
  403039b

Commits on Aug 5, 2021

• modifying read_mds ready for merging with approach 2 code

  fraserwg

  committed
  f5bcb5b

• should now be happily working with tiled 3D data

  fraserwg

  committed
  331ae94

• almost working with tiled data. Missing prefixes when using the _MDSDataStore class

  fraserwg

  committed
  9ea819f

• fixed changes which caused breaking of tests. Can now load a tiled mds dataset

  fraserwg

  committed
  4b5eec3

• added documentation about tiling to the code

  fraserwg

  committed
  56a4f61

• updated documentation

  fraserwg

  committed
  cc2a5af

Commits on Nov 23, 2021

• some bug fixes

  fraserwg

  committed
  cb012dd

• added a tiled dataset fixture

  fraserwg

  committed
  57009ef

• updated the tests to deal with tiled datasets

  fraserwg

  committed
  2a69f97