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Update pictograph.Rmd
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jiaying2508 committed Aug 21, 2023
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2 changes: 1 addition & 1 deletion vignettes/pictograph.Rmd
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Expand Up @@ -35,7 +35,7 @@ The input file can be read using the importCSV function. Alt read count (y), tot

```{r input_data}
input_data <- importCSV(system.file('extdata/example_input.csv', package = 'pictograph'),
alt_reads_thresh = 6, vaf_thresh = 0.02)
alt_reads_thresh = 0, vaf_thresh = 0)
```

## 3. Clustering mutations and estimating CCFs
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