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tests: #535 basic expectations
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@iromeo
iromeo committed Oct 10, 2024
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Expand Up @@ -26,6 +26,52 @@ Feature: Completion for snakemake keyword-like things
| pepfile |
| pepschema |

Scenario Outline: Complete at top-level with respect to deprecations
Given a snakemake project
And I set snakemake language version to "<lang_version>"
And depreciation data file content is
"""
changelog:
- version: "2.0.0"
introduced:
- name: "container"
type: "top-level"
removed:
- name: "singularity"
type: "top-level"
deprecated:
- name: "wildcard_constraints"
type: "top-level"
- version: "1.0.0"
deprecated:
- name: "singularity"
type: "top-level"
removed:
- name: "subworkflow"
type: "top-level"
- version: "0.0.1"
introduced:
- name: "wildcard_constraints"
type: "top-level"
"""
Given I open a file "foo.smk" with text
"""
"foo"
"""
When I put the caret at "foo"
Then I invoke autocompletion popup
Then completion list should contain these items with type text:
| <expected_item> | <expected_item_type> |
Then completion list shouldn't contain:
| <missing_item> |
Examples:
| lang_version | expected_item | expected_item_type | missing_item |
| 1.0.0 | singularity | deprecated in 1.0.0 | subworkflow |
| 2.0.0 | container | >=2.0.0 | singularity |
| 1.0.0 | wildcard_constraints | >=0.0.1 | xxx |
| 2.0.0 | wildcard_constraints | >=0.0.1, deprecated in 2.0.0 | xxx |

Scenario: Complete report at top-level
# We have 2 'report' in completion list, so prev scenario outline doesn't work for 'report'
Given a snakemake project
Expand Down Expand Up @@ -282,6 +328,79 @@ Feature: Completion for snakemake keyword-like things
| module | s | skip_validation |
| module | r | replace_prefix |

Scenario Outline: Complete at rule/checkpoint/module level with respect to deprecations
Given a snakemake project
And I set snakemake language version to "<lang_version>"
And depreciation data file content is
"""
changelog:
- version: "2.0.0"
introduced:
- name: "<introduced_key>"
type: "subsection"
parent:
- "<rule_like>"
removed:
- name: "<deprecated_key>"
type: "subsection"
parent:
- "<rule_like>"
deprecated:
- name: "threads"
type: "subsection"
parent:
- "rule"
- name: "skip_validation"
type: "subsection"
parent:
- "module"
- version: "1.0.0"
deprecated:
- name: "<deprecated_key>"
type: "subsection"
parent:
- "<rule_like>"
removed:
- name: "<removed_key>"
type: "subsection"
parent:
- "<rule_like_removed>"
- version: "0.0.1"
introduced:
- name: "threads"
type: "subsection"
parent:
- "rule"
- name: "skip_validation"
type: "subsection"
parent:
- "module"
"""
Given I open a file "foo.smk" with text
"""
<rule_like> NAME:
#here
"""
When I put the caret at #here
Then I invoke autocompletion popup
Then completion list should contain these items with type text:
| <expected_item> | <expected_item_type> |
Then completion list shouldn't contain:
| <missing_item> |
Examples:
| rule_like | rule_like_removed | lang_version | expected_item | expected_item_type | missing_item | deprecated_key | removed_key | introduced_key |
| rule | rule | 1.0.0 | input | deprecated in 1.0.0 | output | input | output | log |
| rule | checkpoint | 1.0.0 | output | | xxx | input | output | log |
| rule | module | 1.0.0 | output | | xxx | input | output | log |
| checkpoint | checkpoint | 1.0.0 | input | deprecated in 1.0.0 | output | input | output | log |
| rule | rule | 2.0.0 | log | >=2.0.0 | input | input | output | log |
| rule | rule | 1.0.0 | threads | >=0.0.1 | xxx | input | output | log |
| rule | rule | 2.0.0 | threads | >=0.0.1, deprecated in 2.0.0 | xxx | input | output | log |
| module | module | 1.0.0 | config | deprecated in 1.0.0 | snakefile | config | snakefile | meta_wrapper |
| module | module | 1.0.0 | skip_validation | >=0.0.1 | snakefile | input | snakefile | log |
| module | module | 2.0.0 | skip_validation | >=0.0.1, deprecated in 2.0.0 | snakefile | input | snakefile | log |

Scenario Outline: Completion in use declaration
Given a snakemake project
Given I open a file "foo.smk" with text
Expand Down Expand Up @@ -328,6 +447,65 @@ Feature: Completion for snakemake keyword-like things
| MODULE as NAME2 | th | threads |
| MODULE as NAME2 | c | conda |

Scenario Outline: Complete in use with respect to deprecations
Given a snakemake project
And I set snakemake language version to "<lang_version>"
And depreciation data file content is
"""
changelog:
- version: "2.0.0"
introduced:
- name: "log"
type: "subsection"
parent:
- "use"
removed:
- name: "input"
type: "subsection"
parent:
- "use"
deprecated:
- name: "threads"
type: "subsection"
parent:
- "use"
- version: "1.0.0"
deprecated:
- name: "input"
type: "subsection"
parent:
- "use"
removed:
- name: "output"
type: "subsection"
parent:
- "use"
- version: "0.0.1"
introduced:
- name: "threads"
type: "subsection"
parent:
- "use"
"""
Given I open a file "foo.smk" with text
"""
use rule NAME1 from MODULE as NAME2 with:
#here
"""
When I put the caret at #here
Then I invoke autocompletion popup
Then completion list should contain these items with type text:
| <expected_item> | <expected_item_type> |
Then completion list shouldn't contain:
| <missing_item> |
Examples:
| lang_version | expected_item | expected_item_type | missing_item |
| 1.0.0 | input | deprecated in 1.0.0 | output |
| 2.0.0 | log | >=2.0.0 | input |
| 1.0.0 | threads | >=0.0.1 | xxx |
| 2.0.0 | threads | >=0.0.1, deprecated in 2.0.0 | xxx |

Scenario: No rule execution sections in use body
Given a snakemake project
Given I open a file "foo.py" with text
Expand Down

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