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Missing boto3 Dependency For gempyor #238

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TimothyWillard opened this issue Jun 21, 2024 · 1 comment
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Missing boto3 Dependency For gempyor #238

TimothyWillard opened this issue Jun 21, 2024 · 1 comment
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bug Defects or errors in the code. gempyor Concerns the Python core. good first issue Good for newcomers. quick issue Short or easy fix.

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@TimothyWillard
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(venv) twillard@epid-iss-mbp ~/D/G/H/flepimop_sample (main)> gempyor-simulate -c config_sample_2pop.yml
Traceback (most recent call last):
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/venv/bin/gempyor-simulate", line 5, in <module>
    from gempyor.simulate import simulate
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/__init__.py", line 3, in <module>
    from .inference import *
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/inference.py", line 12, in <module>
    from . import seir, model_info
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/seir.py", line 9, in <module>
    from . import NPI, model_info, steps_rk4
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/model_info.py", line 3, in <module>
    from . import seeding, subpopulation_structure, parameters, compartments, file_paths, initial_conditions
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/seeding.py", line 8, in <module>
    from . import utils
  File "/Users/twillard/Desktop/GitHub/HopkinsIDD/flepiMoP/flepimop/gempyor_pkg/src/gempyor/utils.py", line 15, in <module>
    import boto3
ModuleNotFoundError: No module named 'boto3'

Just needs to be added to added to the install_requires section of flepimop/gempyor_pkg/setup.cfg.

@TimothyWillard TimothyWillard added bug Defects or errors in the code. good first issue Good for newcomers. gempyor Concerns the Python core. quick issue Short or easy fix. labels Jun 21, 2024
@TimothyWillard TimothyWillard self-assigned this Jun 21, 2024
TimothyWillard added a commit that referenced this issue Jun 25, 2024
TimothyWillard added a commit that referenced this issue Jul 11, 2024
Had to resolve merge conflicts related to the import of boto3 and
botocore.
TimothyWillard added a commit that referenced this issue Jul 11, 2024
Add `boto3` dependency, add `venv`/`.venv`/`.env` to `.gitignore`
@TimothyWillard
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Closed by GH-239.

jcblemai pushed a commit that referenced this issue Oct 3, 2024
jcblemai pushed a commit that referenced this issue Oct 3, 2024
Had to resolve merge conflicts related to the import of boto3 and
botocore.
jcblemai pushed a commit that referenced this issue Oct 3, 2024
Add `boto3` dependency, add `venv`/`.venv`/`.env` to `.gitignore`
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Labels
bug Defects or errors in the code. gempyor Concerns the Python core. good first issue Good for newcomers. quick issue Short or easy fix.
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