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Merge branch 'breaking-improvments' of https://github.com/HopkinsIDD/…
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…flepiMoP into breaking-improvments

# Conflicts:
#	flepimop/main_scripts/inference_slot.R
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shauntruelove committed Mar 25, 2024
2 parents ca93b3e + fcce2d4 commit c3bf8e5
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1 change: 1 addition & 0 deletions flepimop/main_scripts/inference_slot.R
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Expand Up @@ -481,6 +481,7 @@ for(seir_modifiers_scenario in seir_modifiers_scenarios) {
chimeric_current_likelihood_data <- flepicommon::read_parquet_with_check(first_chimeric_files[['llik_filename']])
global_current_likelihood_data <- flepicommon::read_parquet_with_check(first_global_files[['llik_filename']]) # they are the same ... don't need to load both


#####Get the full likelihood (WHY IS THIS A DATA FRAME)
# Compute total loglik for each sim
global_current_likelihood_total <- sum(global_current_likelihood_data$ll)
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