Test script and workflow 3

GMOD · Jun 10, 2024 · 216074a · 216074a
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diff --git a/packages/apollo-cli/README.md b/packages/apollo-cli/README.md
@@ -16,7 +16,7 @@ $ npm install -g @apollo-annotation/apollo-cli
 $ apollo COMMAND
 running command...
 $ apollo (--version)
-@apollo-annotation/apollo-cli/0.1.8 linux-x64 node-v18.19.0
+@apollo-annotation/apollo-cli/0.1.9 linux-x64 node-v18.19.0
 $ apollo --help [COMMAND]
 USAGE
   $ apollo COMMAND
@@ -87,7 +87,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/assembly/add-fasta.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/add-fasta.ts)_
+[src/commands/assembly/add-fasta.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/add-fasta.ts)_
 
 ## `apollo assembly add-gff`
 
@@ -122,7 +122,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/assembly/add-gff.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/add-gff.ts)_
+[src/commands/assembly/add-gff.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/add-gff.ts)_
 
 ## `apollo assembly check`
 
@@ -165,7 +165,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/assembly/check.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/check.ts)_
+[src/commands/assembly/check.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/check.ts)_
 
 ## `apollo assembly delete`
 
@@ -193,7 +193,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/assembly/delete.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/delete.ts)_
+[src/commands/assembly/delete.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/delete.ts)_
 
 ## `apollo assembly get`
 
@@ -215,7 +215,7 @@ DESCRIPTION
 ```
 
 _See code:
-[src/commands/assembly/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/get.ts)_
+[src/commands/assembly/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/get.ts)_
 
 ## `apollo assembly sequence`
 
@@ -250,7 +250,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/assembly/sequence.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/assembly/sequence.ts)_
+[src/commands/assembly/sequence.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/assembly/sequence.ts)_
 
 ## `apollo change get`
 
@@ -275,7 +275,7 @@ DESCRIPTION
 ```
 
 _See code:
-[src/commands/change/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/change/get.ts)_
+[src/commands/change/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/change/get.ts)_
 
 ## `apollo config [KEY] [VALUE]`
 
@@ -331,7 +331,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/config.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/config.ts)_
+[src/commands/config.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/config.ts)_
 
 ## `apollo feature add-child`
 
@@ -362,7 +362,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/add-child.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/add-child.ts)_
+[src/commands/feature/add-child.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/add-child.ts)_
 
 ## `apollo feature check`
 
@@ -396,7 +396,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/check.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/check.ts)_
+[src/commands/feature/check.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/check.ts)_
 
 ## `apollo feature copy`
 
@@ -428,7 +428,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/copy.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/copy.ts)_
+[src/commands/feature/copy.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/copy.ts)_
 
 ## `apollo feature delete`
 
@@ -453,7 +453,7 @@ DESCRIPTION
 ```
 
 _See code:
-[src/commands/feature/delete.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/delete.ts)_
+[src/commands/feature/delete.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/delete.ts)_
 
 ## `apollo feature edit`
 
@@ -496,7 +496,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/edit.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/edit.ts)_
+[src/commands/feature/edit.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/edit.ts)_
 
 ## `apollo feature edit-attribute`
 
@@ -537,7 +537,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/edit-attribute.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/edit-attribute.ts)_
+[src/commands/feature/edit-attribute.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/edit-attribute.ts)_
 
 ## `apollo feature edit-coords`
 
@@ -572,7 +572,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/edit-coords.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/edit-coords.ts)_
+[src/commands/feature/edit-coords.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/edit-coords.ts)_
 
 ## `apollo feature edit-type`
 
@@ -596,7 +596,7 @@ DESCRIPTION
 ```
 
 _See code:
-[src/commands/feature/edit-type.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/edit-type.ts)_
+[src/commands/feature/edit-type.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/edit-type.ts)_
 
 ## `apollo feature get`
 
@@ -630,7 +630,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/get.ts)_
+[src/commands/feature/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/get.ts)_
 
 ## `apollo feature get-id`
 
@@ -660,7 +660,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/get-id.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/get-id.ts)_
+[src/commands/feature/get-id.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/get-id.ts)_
 
 ## `apollo feature import`
 
@@ -689,7 +689,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/import.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/import.ts)_
+[src/commands/feature/import.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/import.ts)_
 
 ## `apollo feature search`
 
@@ -741,7 +741,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/feature/search.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/feature/search.ts)_
+[src/commands/feature/search.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/feature/search.ts)_
 
 ## `apollo help [COMMANDS]`
 
@@ -803,7 +803,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/login.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/login.ts)_
+[src/commands/login.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/login.ts)_
 
 ## `apollo logout`
 
@@ -833,7 +833,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/logout.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/logout.ts)_
+[src/commands/logout.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/logout.ts)_
 
 ## `apollo refseq get`
 
@@ -866,7 +866,7 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/refseq/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/refseq/get.ts)_
+[src/commands/refseq/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/refseq/get.ts)_
 
 ## `apollo status`
 
@@ -889,7 +889,7 @@ DESCRIPTION
 ```
 
 _See code:
-[src/commands/status.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/status.ts)_
+[src/commands/status.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/status.ts)_
 
 ## `apollo user get`
 
@@ -925,6 +925,6 @@ EXAMPLES
 ```
 
 _See code:
-[src/commands/user/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.8/packages/apollo-cli/src/commands/user/get.ts)_
+[src/commands/user/get.ts](https://github.com/GMOD/Apollo3/blob/v0.1.9/packages/apollo-cli/src/commands/user/get.ts)_
 
 <!-- commandsstop -->
diff --git a/packages/apollo-cli/package.json b/packages/apollo-cli/package.json
@@ -1,7 +1,7 @@
 {
   "name": "@apollo-annotation/apollo-cli",
   "description": "Command line interface for the Apollo annotation server",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "author": "Apollo Team",
   "repository": {
     "type": "git",

diff --git a/packages/apollo-collaboration-server/package.json b/packages/apollo-collaboration-server/package.json
@@ -1,6 +1,6 @@
 {
   "name": "apollo-collaboration-server",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "description": "",
   "author": "",
   "license": "Apache-2.0",

diff --git a/packages/apollo-common/package.json b/packages/apollo-common/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@apollo-annotation/apollo-common",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "repository": {
     "type": "git",
     "url": "https://github.com/GMOD/Apollo3.git",

diff --git a/packages/apollo-mst/package.json b/packages/apollo-mst/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@apollo-annotation/apollo-mst",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "main": "./dist/index.js",
   "scripts": {
     "build": "tsc"

diff --git a/packages/apollo-schemas/package.json b/packages/apollo-schemas/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@apollo-annotation/apollo-schemas",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "main": "./dist/index.js",
   "scripts": {
     "build": "tsc"

diff --git a/packages/apollo-shared/package.json b/packages/apollo-shared/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@apollo-annotation/apollo-shared",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "main": "./dist/index.js",
   "scripts": {
     "start": "tsc --build --watch",

diff --git a/packages/jbrowse-plugin-apollo/package.json b/packages/jbrowse-plugin-apollo/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@apollo-annotation/jbrowse-plugin-apollo",
-  "version": "0.1.8",
+  "version": "0.1.9",
   "description": "Apollo plugin for JBrowse 2",
   "repository": {
     "type": "git",