fixes #2187

GMOD · Jun 21, 2019 · 0f5e2b2 · 0f5e2b2
1 parent 2d59e9a
commit 0f5e2b2
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Showing 3 changed files with 20 additions and 3 deletions.
diff --git a/src/gwt/org/bbop/apollo/gwt/client/AnnotatorPanel.java b/src/gwt/org/bbop/apollo/gwt/client/AnnotatorPanel.java
@@ -31,6 +31,7 @@
 import com.google.gwt.uibinder.client.UiHandler;
 import com.google.gwt.user.cellview.client.*;
 import com.google.gwt.user.cellview.client.Column;
+import com.google.gwt.user.client.Window;
 import com.google.gwt.user.client.ui.*;
 import com.google.gwt.view.client.*;
 import org.bbop.apollo.gwt.client.dto.AnnotationInfo;
@@ -815,6 +816,15 @@ public void onResponseReceived(Request request, Response response) {
                     // parse to make sure we return the complete amount
                     try {
                         JSONValue returnValue = JSONParser.parseStrict(response.getText());
+                        GWT.log("Return: "+returnValue.toString());
+                        Bootbox.confirm("Success.  Reload page to reflect results?", new ConfirmCallback() {
+                            @Override
+                            public void callback(boolean result) {
+                                if(result){
+                                    Window.Location.reload();
+                                }
+                            }
+                        });
                     } catch (Exception e) {
                         Bootbox.alert(e.getMessage());
                     }

diff --git a/src/gwt/org/bbop/apollo/gwt/client/SequencePanel.java b/src/gwt/org/bbop/apollo/gwt/client/SequencePanel.java
@@ -191,7 +191,7 @@ public void onResponseReceived(Request request, Response response) {
                         dataGrid.setRowData(start, SequenceInfoConverter.convertFromJsonArray(jsonArray));
                         if (MainPanel.getInstance().getCurrentOrganism() != null) {
                             deleteSequencesButton.setText("Annotation (" + MainPanel.getInstance().getCurrentOrganism().getNumFeatures() + ")");
-                            deleteVariantEffectsButton.setText("All Variant Effects (" + MainPanel.getInstance().getCurrentOrganism().getVariantEffectCount() + ")");
+                            deleteVariantEffectsButton.setText("Variant Effects (" + MainPanel.getInstance().getCurrentOrganism().getVariantEffectCount() + " on all Seq)");
                         }
                     }
 
@@ -457,7 +457,14 @@ public void callback(boolean result) {
                     }
                     JSONObject returnObject = AnnotationRestService.deleteVariantAnnotationsFromSequences(requestCallback, sequenceInfoSet);
                     loadingDialog.hide();
-                    Bootbox.alert("Variant Effects deleted from " + sequenceInfoSet.size() + " sequences");
+                    Bootbox.confirm("Variant Effects deleted from " + sequenceInfoSet.size() + " sequences.  Reload if effect not visible?", new ConfirmCallback() {
+                        @Override
+                        public void callback(boolean result) {
+                            if(result){
+                                Window.Location.reload();
+                            }
+                        }
+                    });
                 }
             }
         });

diff --git a/src/gwt/org/bbop/apollo/gwt/client/SequencePanel.ui.xml b/src/gwt/org/bbop/apollo/gwt/client/SequencePanel.ui.xml
@@ -163,7 +163,7 @@
                             <h5>Delete</h5>
                         </gwt:HTML>
                     </b:Column>
-                    <b:Column size="MD_7" marginTop="8">
+                    <b:Column size="MD_9" marginTop="8">
                         <b:Button ui:field="deleteSequencesButton" icon="TRASH_O" size="EXTRA_SMALL"
                                   title="Annotations" marginLeft="1" text="Annotations"/>
                         <b:Button ui:field="deleteVariantEffectsButton" icon="TRASH_O" size="EXTRA_SMALL"