Handmerge develop to MAPL3 2023-Sep-19 #3343
Workflow file for this run
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| name: Build Tests | |
| on: | |
| pull_request: | |
| types: [opened, synchronize, reopened] | |
| # Do not run if the only files changed cannot affect the build | |
| paths-ignore: | |
| - "**.md" | |
| - "**.json" | |
| - "Python/**" | |
| - ".github/CODEOWNERS" | |
| - ".github/PULL_REQUEST_TEMPLATE.md" | |
| - ".editorconfig" | |
| jobs: | |
| build_test_mapl: | |
| name: Build and Test MAPL GNU | |
| runs-on: ubuntu-latest | |
| container: | |
| image: gmao/ubuntu20-geos-env-mkl:v7.14.0-openmpi_4.1.4-gcc_12.1.0 | |
| # Per https://github.com/actions/virtual-environments/issues/1445#issuecomment-713861495 | |
| # It seems like we might not need secrets on GitHub Actions which is good for forked | |
| # pull requests | |
| #credentials: | |
| #username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| #password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| env: | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| OMPI_MCA_btl_vader_single_copy_mechanism: none | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/[email protected] | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| - name: Set all directories as git safe | |
| run: | | |
| git config --global --add safe.directory '*' | |
| - name: Versions etc. | |
| run: | | |
| gfortran --version | |
| mpirun --version | |
| echo $BASEDIR | |
| - name: Mepo clone external repos | |
| run: | | |
| mepo init | |
| mepo clone | |
| mepo status | |
| - name: CMake | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DBASEDIR=$BASEDIR/Linux -DCMAKE_Fortran_COMPILER=gfortran -DCMAKE_BUILD_TYPE=Debug -DMPIEXEC_PREFLAGS='--oversubscribe' | |
| - name: Build | |
| run: | | |
| cd build | |
| make -j4 install | |
| - name: Run MAPL unit tests | |
| run: | | |
| cd build | |
| make -j4 build-tests | |
| # skip performance tests | |
| # NOTE: Currently Open MPI fails on the bundleio with: | |
| # | |
| # The OSC pt2pt component does not support MPI_THREAD_MULTIPLE in this release. | |
| # Workarounds are to run on a single node, or to use a system with an RDMA | |
| # capable network such as Infiniband. | |
| # | |
| # For now, we run GNU/Open MPI without the bundleio tests. Some indications that | |
| # Open MPI 5 will not have this limitation | |
| ctest -E bundleio -LE 'PERFORMANCE|EXTDATA1G_BIG_TESTS|EXTDATA2G_BIG_TESTS' --output-on-failure | |
| build_test_mapl_intel: | |
| name: Build and Test MAPL Intel | |
| runs-on: ubuntu-latest | |
| container: | |
| image: gmao/ubuntu20-geos-env:v7.14.0-intelmpi_2021.6.0-intel_2022.1.0 | |
| # Per https://github.com/actions/virtual-environments/issues/1445#issuecomment-713861495 | |
| # It seems like we might not need secrets on GitHub Actions which is good for forked | |
| # pull requests | |
| #credentials: | |
| #username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| #password: ${{ secrets.DOCKERHUB_TOKEN }} | |
| steps: | |
| - name: Cancel Previous Runs | |
| uses: styfle/[email protected] | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 1 | |
| - name: Set all directories as git safe | |
| run: | | |
| git config --global --add safe.directory '*' | |
| - name: Versions etc. | |
| run: | | |
| ifort --version | |
| mpirun --version | |
| echo $BASEDIR | |
| - name: Mepo clone external repos | |
| run: | | |
| mepo init | |
| mepo clone | |
| mepo status | |
| - name: CMake | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DBASEDIR=$BASEDIR/Linux -DCMAKE_Fortran_COMPILER=ifort -DCMAKE_BUILD_TYPE=Debug | |
| - name: Build | |
| run: | | |
| cd build | |
| make -j4 install | |
| - name: Run MAPL unit tests | |
| run: | | |
| cd build | |
| make -j4 build-tests | |
| # skip performance tests | |
| ctest -LE 'PERFORMANCE|EXTDATA1G_BIG_TESTS|EXTDATA2G_BIG_TESTS' --output-on-failure |