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Remove now obsolite code + small fix. #453

Remove now obsolite code + small fix.

Remove now obsolite code + small fix. #453

name: build-macos-homebrew
on:
workflow_dispatch:
push:
paths-ignore:
- '**.nix'
- 'flake.lock'
pull_request:
paths-ignore:
- '**.nix'
- 'flake.lock'
concurrency: ci-macos-homebrew-${{ github.ref }}
jobs:
macos-homebrew:
runs-on: ${{ matrix.os }}
strategy:
# Allow other runners in the matrix to continue if some fail
fail-fast: false
matrix:
os: [macos-14, macos-13]
steps:
- name: get CPU information
run: |
sysctl hw
sysctl machdep
- name: checkout repository
uses: actions/checkout@v4
- name: install dependencies
# Homebrew's Python conflicts with the Python that comes pre-installed
# on the GitHub runners. Some of the dependencies depend on different
# versions of Homebrew's Python. Enforce using the ones from Homebrew
# to avoid errors on updates.
# See: https://github.com/orgs/Homebrew/discussions/3928
# It looks like "gfortran" isn't working correctly unless "gcc" is
# re-installed.
run: |
brew update
brew install --overwrite [email protected] [email protected]
brew reinstall gcc
brew install \
cmake libomp openblas open-mpi suitesparse \
qwt vtk opencascade
echo "HOMEBREW_PREFIX=$(brew --prefix)" >> $GITHUB_ENV
- name: configure
env:
LDFLAGS: -L${{ env.HOMEBREW_PREFIX }}/opt/libomp/lib -lomp
run: |
mkdir ${GITHUB_WORKSPACE}/build
cd ${GITHUB_WORKSPACE}/build
cmake \
-DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_C_COMPILER=clang \
-DCMAKE_CXX_COMPILER=clang++ \
-DCMAKE_Fortran_COMPILER=gfortran \
-DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}/usr" \
-DBLA_VENDOR="OpenBLAS" \
-DCMAKE_PREFIX_PATH="${HOMEBREW_PREFIX}/opt/libomp;${HOMEBREW_PREFIX}/opt/openblas;${HOMEBREW_PREFIX}/opt/qt;${HOMEBREW_PREFIX}/opt/qwt" \
-DWITH_OpenMP=ON \
-DOpenMP_C_FLAGS="-Xclang -fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \
-DOpenMP_CXX_FLAGS="-Xclang -fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \
-DOpenMP_Fortran_FLAGS="-fopenmp -I${HOMEBREW_PREFIX}/opt/libomp/include" \
-DWITH_LUA=ON \
-DWITH_MPI=ON \
-DMPI_TEST_MAXPROC=2 \
-DWITH_Zoltan=OFF \
-DWITH_Mumps=OFF \
-DWITH_CHOLMOD=ON \
-DWITH_ElmerIce=ON \
-DWITH_ELMERGUI=ON \
-DWITH_QT6=ON \
-DQWT_INCLUDE_DIR="${HOMEBREW_PREFIX}/opt/qwt/lib/qwt.framework/Headers" \
-DWITH_VTK=ON \
-DWITH_OCC=ON \
-DWITH_MATC=ON \
-DWITH_PARAVIEW=ON \
-DCREATE_PKGCONFIG_FILE=ON \
..
- name: build
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --build . -j$(sysctl -n hw.logicalcpu)
- name: install
run: |
cd ${GITHUB_WORKSPACE}/build
cmake --install .
- name: check
id: run-ctest
timeout-minutes: 150
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
ctest . \
-LE slow \
-j$(sysctl -n hw.logicalcpu) \
--timeout 300
- name: re-run tests
if: always() && (steps.run-ctest.outcome == 'failure')
timeout-minutes: 60
env:
CTEST_OUTPUT_ON_FAILURE: 1
run: |
cd ${GITHUB_WORKSPACE}/build
# get names of failed tests and strip potential "_np*" suffix
failed_tests=($(ctest . -N --rerun-failed | grep -E "Test\s+#.*" | awk '{print $3}' | sed -e 's/_np[0-9]*$//g'))
# remove duplicate test names
unique_failed_tests=($(echo "${failed_tests[@]}" | tr ' ' '\n' | sort -u | tr '\n' ' '))
for test in "${unique_failed_tests[@]}"; do
# check if test is from fem or ElmerIce
if [ -d fem/tests/${test} ]; then
test_root=fem/tests
else
test_root=elmerice/Tests
fi
echo "::group::Content of ${test_root}/${test}"
echo ---- Files ----
ls -Rl ${test_root}/${test}
if [ -f ${test_root}/${test}/test-stderr*.log ]; then
echo ---- Content of test-stderr*.log ----
cat ${test_root}/${test}/test-stderr*.log
fi
if [ -f ${test_root}/${test}/test-stdout*.log ]; then
echo ---- Content of test-stdout*.log ----
cat ${test_root}/${test}/test-stdout*.log
fi
echo "::endgroup::"
done
echo "::group::Re-run failing tests"
ctest --rerun-failed --output-on-failure --timeout 180 || true
echo "::endgroup::"
echo "::group::Log from these tests"
[ ! -f Testing/Temporary/LastTest.log ] || cat Testing/Temporary/LastTest.log
echo "::endgroup::"