Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

added croo json #27

Open
wants to merge 1 commit into
base: dev
Choose a base branch
from
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
86 changes: 86 additions & 0 deletions segway.croo.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,86 @@
{
"segway.bed_to_bigbed": {
"bigbed": {
"table": "segway bigbed file from task bed_to_bigbed"
}
},
"segway.interpretation": {
"classifier_data": {
"table": "calssifier data from interpretation"
},
"classifier_probailities": {
"table": "classifier probailities from interpretation"
},
"memonics": {
"table": "memonics txt file from interpretation"
},
"stats": {
"table": "stats files from interpretation"
}
},
"segway.make_genomedata": {
"genomedata": {
"table": "genomedata from task make_genomedata"
}
},
"segway.make_trackname_assay": {
"trackname_assay": {
"table": "trackname assay from make trackname assay"
}
},
"segway.recolor_bed": {
"recolored_bed": {
"table": "recolored bed"
}
},
"segway.relabel": {
"relabeled_bed": {
"table": "relabeled bed"
}
},
"segway.segtools": {
"feature_aggregation_info": {
"table": "feature aggregation info from segtools"
},
"feature_aggregation_tab": {
"table": "feature aggregation from segtools"
},
"gmtk_info": {
"table": "gmtk parameters info from segtools"
},
"length_distribution_info": {
"table": "length distribution info from segtools"
},
"length_distribution_tab": {
"table": "length distribution from segtools"
},
"segment_sizes_tab": {
"table": "segment sizes from segtools"
},
"signal_distribution_info": {
"table": "signal distribution files from segtools"
},
"signal_distribution_tab": {
"table": "signal distribution from segtools"
}
},
"segway.segway_annotate": {
"identifydir": {
"table": "identifydir tar file from segway_annotate"
},
"output_bed": {
"table": "segway annotate bed file from task segway_annotate"
},
"segway_params": {
"table": "params from segway_annotate"
}
},
"segway.segway_train": {
"traindir": {
"table": "segwayTrain tar file from task segway_train"
},
"trained_params": {
"table": "params file from task segway_train"
}
}
}