{2023.06}[foss/2021b] matplotlib v3.4.3 #339

laraPPr · 2023-09-25T09:59:21Z

Qhull/2020.2-GCCcore-11.2.0 (Qhull-2020.2-GCCcore-11.2.0.eb)
cppy/1.1.0-GCCcore-11.2.0 (cppy-1.1.0-GCCcore-11.2.0.eb)
Pillow/8.3.2-GCCcore-11.2.0 (Pillow-8.3.2-GCCcore-11.2.0.eb)
Tkinter/3.9.6-GCCcore-11.2.0 (Tkinter-3.9.6-GCCcore-11.2.0.eb)
matplotlib/3.4.3-foss-2021b (matplotlib-3.4.3-foss-2021b.eb)

eessi-bot · 2023-09-25T09:59:25Z

Instance eessi-bot-citc-aws is configured to build:

arch x86_64/generic for repo eessi-2021.12
arch x86_64/generic for repo eessi.org-2023.06-compat
arch x86_64/generic for repo eessi.io-2023.06-compat
arch x86_64/generic for repo eessi-2023.06-software
arch x86_64/intel/haswell for repo eessi-2021.12
arch x86_64/intel/haswell for repo eessi.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi.io-2023.06-compat
arch x86_64/intel/haswell for repo eessi-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-2021.12
arch x86_64/intel/skylake_avx512 for repo eessi.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-software
arch x86_64/amd/zen2 for repo eessi-2021.12
arch x86_64/amd/zen2 for repo eessi.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-2023.06-software
arch x86_64/amd/zen3 for repo eessi-2021.12
arch x86_64/amd/zen3 for repo eessi.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-2023.06-software
arch aarch64/generic for repo eessi-2021.12
arch aarch64/generic for repo eessi.org-2023.06-compat
arch aarch64/generic for repo eessi.io-2023.06-compat
arch aarch64/generic for repo eessi-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-2021.12
arch aarch64/neoverse_n1 for repo eessi.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-2021.12
arch aarch64/neoverse_v1 for repo eessi.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-2023.06-software

laraPPr · 2023-09-25T10:15:39Z

bot:build repo:eessi-2023.06-software arch:x86_64/generic

laraPPr · 2023-09-25T10:18:28Z

bot: build repo:eessi-2023.06-software arch:x86_64/generic

eessi-bot · 2023-09-25T10:18:32Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software arch:x86_64/generic from laraPPr
- expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 7543, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-09-25T10:18:38Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_339/7543

date	job status	comment
Sep 25 10:18:37 UTC 2023	submitted	job id `7543` awaits release by job manager
Sep 25 10:18:59 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 25 10:22:54 UTC 2023	running	job `7543` is running
Sep 25 10:47:06 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7543.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1695638746.tar.gz` size: 1 MiB (1120053 bytes) entries: 208 modules under 2023.06/software/linux/x86_64/generic/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/generic/software `cppy/1.1.0-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

laraPPr · 2023-09-25T11:34:00Z

ERROR: Command errored out with exit status 1: /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Python/3.9.6-GCCcore-11.2.0/bin/python -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/eb-gxasriu9/eb-qrb30k5v/eb-klv0wyfj/eb-qd7tx8ww/pip-req-build-1s21bwfi/setup.py'"'"'; file='"'"'/tmp/eb-gxasriu9/eb-qrb30k5v/eb-klv0wyfj/eb-qd7tx8ww/pip-req-build-1s21bwfi/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/eb-gxasriu9/eb-qrb30k5v/eb-klv0wyfj/eb-qd7tx8ww/pip-record-igyea73l/install-record.txt --single-version-externally-managed --prefix /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Pillow/8.3.2-GCCcore-11.2.0 --compile --install-headers /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Pillow/8.3.2-GCCcore-11.2.0/include/python3.9/Pillow Check the logs for full command output.

(at easybuild/tools/run.py:681 in parse_cmd_output)

boegel · 2023-09-26T20:34:38Z

Actual build error for Pillow-8.3.2-GCCcore-11.2.0.eb:

    In file included from /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Python/3.9.6-GCCcore-11.2.0/include/python3.9/Python.h:25,
                     from src/Tk/../libImaging/ImPlatform.h:10,
                     from src/Tk/../libImaging/Imaging.h:13,
                     from src/Tk/tkImaging.c:42:
    /usr/include/stdio.h:781:10: fatal error: bits/sys_errlist.h: No such file or directory
      781 | #include <bits/sys_errlist.h>
          |          ^~~~~~~~~~~~~~~~~~~~

The /usr/include/stdio.h is the problem here, this should be coming from the compat layer rather than from the host OS.

It seems like these paths are hardcoded in Pillow, see https://github.com/python-pillow/Pillow/blob/main/setup.py#L608, but it seems like there's a disable-platform-guessing option available to disable this?

laraPPr · 2023-09-27T07:20:23Z

Build flag: -C platform-guessing=disable. Skips all of the platform dependent guessing of include and library directories for automated build systems that configure the proper paths in the environment variables (e.g. Buildroot).
https://pillow.readthedocs.io/en/stable/installation.html
python-pillow/Pillow#5799 This issue is also related to using platform-guessing=disable

laraPPr · 2023-09-29T07:31:42Z

easybuilders/easybuild-easyconfigs#18881

laraPPr · 2023-10-03T09:11:47Z

bot: build repo:eessi-2023.06-software arch:x86_64/generic

eessi-bot · 2023-10-03T09:11:49Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software arch:x86_64/generic from laraPPr
- expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 7683, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-10-03T09:11:57Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.10/pr_339/7683

date	job status	comment
Oct 03 09:11:56 UTC 2023	submitted	job id `7683` awaits release by job manager
Oct 03 09:12:56 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 03 09:16:59 UTC 2023	running	job `7683` is running
Oct 03 09:31:17 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7683.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

laraPPr · 2023-10-03T09:18:51Z

bot: help

eessi-bot · 2023-10-03T09:18:53Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command help from laraPPr
- expanded format: help
handling command help resulted in:
How to send commands to bot instances
- Commands must be sent with a new comment (edits of existing comments are ignored).
- A comment may contain multiple commands, one per line.
- Every command begins at the start of a line and has the syntax bot: COMMAND [ARGUMENTS]*
- Currently supported COMMANDs are: help, build, show_config
For more information, see https://www.eessi.io/docs/bot

laraPPr · 2023-10-03T10:26:31Z

== 2023-10-03 09:29:25,858 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 in caller_info): Failed to get data for PR #18851 from easybuilders/easybuild-easyconfigs (HTTP Error 403: rate limit exceeded)

Please check PR #, account and repo. (at easybuild/tools/github.py:2411 in fetch_pr_data)

laraPPr · 2023-10-03T11:31:35Z

bot: build repo:eessi-2023.06-software arch:x86_64/generic

eessi-bot · 2023-10-03T11:31:38Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software arch:x86_64/generic from laraPPr
- expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 7684, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-10-03T11:31:45Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.10/pr_339/7684

date	job status	comment
Oct 03 11:31:44 UTC 2023	submitted	job id `7684` awaits release by job manager
Oct 03 11:32:37 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 03 11:36:40 UTC 2023	running	job `7684` is running
Oct 03 11:46:52 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7684.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

laraPPr · 2023-10-03T12:17:53Z

== 2023-10-03 11:45:00,709 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 in caller_info): Build of /tmp/eb-3qgb0teu/eb-hyhyto6j/eb-h04p81_x/eb-k5s_gwe_/files_pr18881/p/Pillow/Pillow-8.3.2-GCCcore-11.2.0.eb failed (err: 'build failed (first 300 chars): cmd " /cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Python/3.9.6-GCCcore-11.2.0/bin/python -m pip install --prefix=/cvmfs/pilot.eessi-hpc.org/versions/2023.06/software/linux/x86_64/generic/software/Pillow/8.3.2-GCCcore-11.2.0 --global-option=build_ext --global-op') (at easybuild/main.py:175 in build_and_install_software)

laraPPr · 2023-10-03T12:22:37Z

There are more than one log file in /mnt/shared/bot-build-logs/jobs/7684:

easybuild-5p1lf80p.log is related to ReFrame

== 2023-10-03 11:45:46,387 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 in caller_info): Failed to get data for PR #18851 from easybuilders/easybuild-easyconfigs (HTTP Error 403: rate limit exceeded)

Please check PR #, account and repo. (at easybuild/tools/github.py:2411 in fetch_pr_data)

is related to OpenBlas

== 2023-10-03 11:45:42,364 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 in caller_info): Failed to get data for PR #18887 from easybuilders/easybuild-easyconfigs (HTTP Error 403: rate limit exceeded)

Please check PR #, account and repo. (at easybuild/tools/github.py:2411 in fetch_pr_data)

easybuild-tb_c5rsa.log is the actual log failed log for this pr

boegel · 2023-10-03T15:09:07Z

The actual build issue with Pillow now is that it can't find zlib:

    The headers or library files could not be found for zlib,
    a required dependency when compiling Pillow from source.

So we need to somehow instruct Pillow's setup.py to look for zlib into the compat layer.

This may mean patching the hardcoded paths to /usr/include in setup.py, and not using --disable-platform-guessing (which was introduced in easybuilders/easybuild-easyconfigs#18881), or maybe just adding the appropriate paths to $CPATH and $LIBRARY_PATH via a hook:

CPATH=/cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/usr/include/
LIBRARY_PATH=/cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/usr/lib64

boegel · 2023-10-10T15:48:08Z

I've opened a support issue for the trouble with getting Pillow installed into EESSI: https://gitlab.com/eessi/support/-/issues/9

TopRichard · 2023-10-11T07:36:07Z

Check matplotlib v3.5.2 : #362

eessi-bot · 2023-10-31T09:58:45Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command show_config from laraPPr
- expanded format: show_config
handling command show_config resulted in:
- added comment {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment) to show configuration

eessi-bot · 2023-10-31T09:58:48Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software

laraPPr · 2023-10-31T10:03:01Z

bot: build arch:x86_64/generic repo:eessi-hpc.org-2023.06-software

eessi-bot · 2023-10-31T10:03:05Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build arch:x86_64/generic repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/generic repository:eessi-hpc.org-2023.06-software
handling command build architecture:x86_64/generic repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 408, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-10-31T10:03:11Z

New job on instance eessi-bot-mc-aws for architecture x86_64-generic for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_339/408

date	job status	comment
Oct 31 10:03:10 UTC 2023	submitted	job id `408` awaits release by job manager
Oct 31 10:03:59 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 31 10:10:02 UTC 2023	running	job `408` is running
Oct 31 10:24:18 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-408.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1698747821.tar.gz` size: 1 MiB (1183895 bytes) entries: 208 modules under 2023.06/software/linux/x86_64/generic/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/generic/software `cppy/1.1.0-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

laraPPr · 2023-11-20T10:43:45Z

bot: build arch:x86_64/generic repo:eessi-hpc.org-2023.06-software

eessi-bot · 2023-11-20T10:43:47Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build arch:x86_64/generic repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/generic repository:eessi-hpc.org-2023.06-software
handling command build architecture:x86_64/generic repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 864, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-11-20T10:43:51Z

New job on instance eessi-bot-mc-aws for architecture x86_64-generic for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/864

date	job status	comment
Nov 20 10:43:50 UTC 2023	submitted	job id `864` awaits release by job manager
Nov 20 10:44:26 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:21:45 UTC 2023	running	job `864` is running
Nov 20 12:40:17 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-864.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1700483986.tar.gz` size: 17 MiB (17904259 bytes) entries: 1474 modules under 2023.06/software/linux/x86_64/generic/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/generic/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:06:38 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1700483986.tar.gz` to S3 bucket succeeded

laraPPr · 2023-11-20T10:56:46Z

bot: show_config

eessi-bot · 2023-11-20T10:56:49Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command show_config from laraPPr
- expanded format: show_config
handling command show_config resulted in:
- added comment {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment) to show configuration

eessi-bot · 2023-11-20T10:56:51Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/generic for repo eessi.io-2023.06-compat
arch x86_64/generic for repo eessi.io-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi.io-2023.06-compat
arch x86_64/intel/haswell for repo eessi.io-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen2 for repo eessi.io-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen3 for repo eessi.io-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi.io-2023.06-compat
arch aarch64/generic for repo eessi.io-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi.io-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi.io-2023.06-software

laraPPr · 2023-11-20T10:59:03Z

bot: build arch:x86_64/intel/haswell repo:eessi-hpc.org-2023.06-software

eessi-bot · 2023-11-20T10:59:07Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build arch:x86_64/intel/haswell repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/intel/haswell repository:eessi-hpc.org-2023.06-software
handling command build architecture:x86_64/intel/haswell repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 865, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-11-20T10:59:11Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/865

date	job status	comment
Nov 20 10:59:10 UTC 2023	submitted	job id `865` awaits release by job manager
Nov 20 10:59:29 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 11:04:32 UTC 2023	running	job `865` is running
Nov 20 11:23:59 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-865.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-haswell-1700479407.tar.gz` size: 17 MiB (17996299 bytes) entries: 1474 modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/intel/haswell/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/intel/haswell `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:06:58 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-haswell-1700479407.tar.gz` to S3 bucket succeeded

laraPPr · 2023-11-20T11:56:14Z

bot: build arch:x86_64/intel/skylake_avx512 repo:eessi-hpc.org-2023.06-software
bot: build arch:x86_64/amd/zen2 repo:eessi-hpc.org-2023.06-software
bot: build arch:x86_64/amd/zen3 repo:eessi-hpc.org-2023.06-software
bot: build arch:aarch64/generic repo:eessi-hpc.org-2023.06-software
bot: build arch:aarch64/neoverse_n1 repo:eessi-hpc.org-2023.06-software
bot: build arch:aarch64/neoverse_v1 repo:eessi-hpc.org-2023.06-software

eessi-bot · 2023-11-20T11:56:17Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build arch:x86_64/intel/skylake_avx512 repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/intel/skylake_avx512 repository:eessi-hpc.org-2023.06-software
received bot command build arch:x86_64/amd/zen2 repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/amd/zen2 repository:eessi-hpc.org-2023.06-software
received bot command build arch:x86_64/amd/zen3 repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:x86_64/amd/zen3 repository:eessi-hpc.org-2023.06-software
received bot command build arch:aarch64/generic repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:aarch64/generic repository:eessi-hpc.org-2023.06-software
received bot command build arch:aarch64/neoverse_n1 repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:aarch64/neoverse_n1 repository:eessi-hpc.org-2023.06-software
received bot command build arch:aarch64/neoverse_v1 repo:eessi-hpc.org-2023.06-software from laraPPr
- expanded format: build architecture:aarch64/neoverse_v1 repository:eessi-hpc.org-2023.06-software
handling command build architecture:x86_64/intel/skylake_avx512 repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 866, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)
handling command build architecture:x86_64/amd/zen2 repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 867, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)
handling command build architecture:x86_64/amd/zen3 repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 868, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)
handling command build architecture:aarch64/generic repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 869, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)
handling command build architecture:aarch64/neoverse_n1 repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 870, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)
handling command build architecture:aarch64/neoverse_v1 repository:eessi-hpc.org-2023.06-software resulted in:
- submitted job 871, for details & status see {2023.06}[foss/2021b] matplotlib v3.4.3 #339 (comment)

eessi-bot · 2023-11-20T11:56:22Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/866

date	job status	comment
Nov 20 11:56:21 UTC 2023	submitted	job id `866` awaits release by job manager
Nov 20 11:57:18 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:04:45 UTC 2023	running	job `866` is running
Nov 20 12:21:50 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-866.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1700482817.tar.gz` size: 17 MiB (17954469 bytes) entries: 1474 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:07:18 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1700482817.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-11-20T11:56:26Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/867

date	job status	comment
Nov 20 11:56:25 UTC 2023	submitted	job id `867` awaits release by job manager
Nov 20 11:57:13 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:04:40 UTC 2023	running	job `867` is running
Nov 20 12:21:48 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-867.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1700482858.tar.gz` size: 17 MiB (17988665 bytes) entries: 1474 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:07:38 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1700482858.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-11-20T11:56:29Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen3 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/868

date	job status	comment
Nov 20 11:56:28 UTC 2023	submitted	job id `868` awaits release by job manager
Nov 20 11:57:15 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:04:42 UTC 2023	running	job `868` is running
Nov 20 12:19:35 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-868.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen3-1700482700.tar.gz` size: 17 MiB (17986714 bytes) entries: 1474 modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/x86_64/amd/zen3/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/x86_64/amd/zen3 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:07:58 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen3-1700482700.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-11-20T11:56:33Z

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/869

date	job status	comment
Nov 20 11:56:32 UTC 2023	submitted	job id `869` awaits release by job manager
Nov 20 11:57:05 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:01:21 UTC 2023	running	job `869` is running
Nov 20 12:21:47 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-869.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1700482815.tar.gz` size: 16 MiB (17583353 bytes) entries: 1474 modules under 2023.06/software/linux/aarch64/generic/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/aarch64/generic/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/aarch64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:08:18 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1700482815.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-11-20T11:56:37Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_n1 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/870

date	job status	comment
Nov 20 11:56:36 UTC 2023	submitted	job id `870` awaits release by job manager
Nov 20 11:57:07 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:01:23 UTC 2023	running	job `870` is running
Nov 20 12:20:42 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-870.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_n1-1700482773.tar.gz` size: 16 MiB (17599955 bytes) entries: 1474 modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/aarch64/neoverse_n1/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/aarch64/neoverse_n1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:08:38 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_n1-1700482773.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-11-20T11:56:41Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_v1 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.11/pr_339/871

date	job status	comment
Nov 20 11:56:40 UTC 2023	submitted	job id `871` awaits release by job manager
Nov 20 11:57:10 UTC 2023	released	job awaits launch by Slurm scheduler
Nov 20 12:02:29 UTC 2023	running	job `871` is running
Nov 20 12:18:27 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-871.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-1700482617.tar.gz` size: 16 MiB (17607297 bytes) entries: 1474 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `cppy/1.1.0-GCCcore-11.2.0.lua` `matplotlib/3.4.3-foss-2021b.lua` `Pillow/8.3.2-GCCcore-11.2.0.lua` `Qhull/2020.2-GCCcore-11.2.0.lua` `Tkinter/3.9.6-GCCcore-11.2.0.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `cppy/1.1.0-GCCcore-11.2.0` `matplotlib/3.4.3-foss-2021b` `Pillow/8.3.2-GCCcore-11.2.0` `Qhull/2020.2-GCCcore-11.2.0` `Tkinter/3.9.6-GCCcore-11.2.0` other under 2023.06/software/linux/aarch64/neoverse_v1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Nov 21 09:08:58 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_v1-1700482617.tar.gz` to S3 bucket succeeded

…1.2-2023a {2023.06}[foss/2023a] SuperLU_DIST v8.1.2

{2023.06}[foss/2021b] matplotlib v3.4.3

18c36d5

laraPPr added the pilot-2023.06 label Sep 25, 2023

lara added 2 commits October 3, 2023 10:57

Merge branch '2023.06' into matplotlib_3.4.3

5b8d3a7

add Pillow to easystack

73f7e42

Merge branch '2023.06' into matplotlib_3.4.3

04fae34

laraPPr mentioned this pull request Oct 30, 2023

{2023.06}[foss/2022a] DP3 6.0 and WSClean 3.4 #370

Merged

Merge branch '2023.06' into matplotlib_3.4.3

019507a

lara added 2 commits November 20, 2023 11:18

Merge remote-tracking branch 'origin' into matplotlib_3.4.3

5220eb2

Make Pillow sysroot aware

7c679a0

laraPPr added the ready-to-deploy Mark a PR as ready to deploy label Nov 20, 2023

bedroge added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Nov 21, 2023

bedroge approved these changes Nov 21, 2023

View reviewed changes

bedroge merged commit 77c8845 into EESSI:2023.06 Nov 21, 2023
33 checks passed

trz42 pushed a commit to trz42/software-layer that referenced this pull request Apr 24, 2024

Merge pull request EESSI#339 from trz42/nessi-2023.06-superlu_dist-8.…

9da51d8

…1.2-2023a {2023.06}[foss/2023a] SuperLU_DIST v8.1.2

{2023.06}[foss/2021b] matplotlib v3.4.3 #339

{2023.06}[foss/2021b] matplotlib v3.4.3 #339

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