{2023.06}[SYSTEM] Java v11 #327

laraPPr · 2023-09-06T09:19:20Z

No description provided.

eessi-bot · 2023-09-06T09:19:23Z

Instance eessi-bot-citc-aws is configured to build:

arch x86_64/generic for repo eessi-2021.12
arch x86_64/generic for repo eessi-2023.06-compat
arch x86_64/generic for repo eessi-2023.06-software
arch x86_64/intel/haswell for repo eessi-2021.12
arch x86_64/intel/haswell for repo eessi-2023.06-compat
arch x86_64/intel/haswell for repo eessi-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-2021.12
arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-software
arch x86_64/amd/zen2 for repo eessi-2021.12
arch x86_64/amd/zen2 for repo eessi-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-2023.06-software
arch x86_64/amd/zen3 for repo eessi-2021.12
arch x86_64/amd/zen3 for repo eessi-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-2023.06-software
arch aarch64/generic for repo eessi-2021.12
arch aarch64/generic for repo eessi-2023.06-compat
arch aarch64/generic for repo eessi-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-2021.12
arch aarch64/neoverse_n1 for repo eessi-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-2021.12
arch aarch64/neoverse_v1 for repo eessi-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-2023.06-software

laraPPr · 2023-09-06T10:03:32Z

bot: build repo:eessi-2023.06-software

eessi-bot · 2023-09-06T10:03:34Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software from laraPPr
- expanded format: build repository:eessi-2023.06-software
handling command build repository:eessi-2023.06-software resulted in:
- submitted job 7162, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7163, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7164, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7165, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7166, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7167, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7168, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7169, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)

eessi-bot · 2023-09-06T10:04:04Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7162

date	job status	comment
Sep 06 10:04:03 UTC 2023	submitted	job id `7162` awaits release by job manager
Sep 06 10:04:24 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:07:40 UTC 2023	running	job `7162` is running
Sep 06 10:13:25 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7162.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T10:04:06Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-haswell for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7163

date	job status	comment
Sep 06 10:04:05 UTC 2023	submitted	job id `7163` awaits release by job manager
Sep 06 10:04:21 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:07:38 UTC 2023	running	job `7163` is running
Sep 06 10:14:31 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7163.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T10:04:08Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7164

date	job status	comment
Sep 06 10:04:07 UTC 2023	submitted	job id `7164` awaits release by job manager
Sep 06 10:04:19 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:07:36 UTC 2023	running	job `7164` is running
Sep 06 10:13:24 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7164.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T10:04:10Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen2 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7165

date	job status	comment
Sep 06 10:04:09 UTC 2023	submitted	job id `7165` awaits release by job manager
Sep 06 10:04:17 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:07:34 UTC 2023	running	job `7165` is running
Sep 06 10:13:22 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7165.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T10:04:11Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7166

date	job status	comment
Sep 06 10:04:10 UTC 2023	submitted	job id `7166` awaits release by job manager
Sep 06 10:04:15 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:07:33 UTC 2023	running	job `7166` is running
Sep 06 10:13:20 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7166.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T10:04:13Z

New job on instance eessi-bot-citc-aws for architecture aarch64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7167

date	job status	comment
Sep 06 10:04:12 UTC 2023	submitted	job id `7167` awaits release by job manager
Sep 06 10:05:30 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:08:51 UTC 2023	running	job `7167` is running
Sep 06 10:15:34 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7167.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1693995295.tar.gz` size: 182 MiB (191657511 bytes) entries: 622 modules under 2023.06/software/linux/aarch64/generic/modules/all `Java/11.0.18.lua` software under 2023.06/software/linux/aarch64/generic/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

eessi-bot · 2023-09-06T10:04:15Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_n1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7168

date	job status	comment
Sep 06 10:04:14 UTC 2023	submitted	job id `7168` awaits release by job manager
Sep 06 10:05:28 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:08:49 UTC 2023	running	job `7168` is running
Sep 06 10:21:49 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7168.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_n1-1693995666.tar.gz` size: 182 MiB (191673663 bytes) entries: 622 modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all `Java/11.0.18.lua` software under 2023.06/software/linux/aarch64/neoverse_n1/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/neoverse_n1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

eessi-bot · 2023-09-06T10:04:17Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7169

date	job status	comment
Sep 06 10:04:16 UTC 2023	submitted	job id `7169` awaits release by job manager
Sep 06 10:05:26 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 10:08:47 UTC 2023	running	job `7169` is running
Sep 06 10:21:48 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7169.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-1693995647.tar.gz` size: 182 MiB (191670914 bytes) entries: 622 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `Java/11.0.18.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/neoverse_v1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

laraPPr · 2023-09-06T10:20:07Z

== 2023-09-06 10:12:31,791 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 
in caller_info): Sanity check failed: sanity check command java -help exited with code 127 (output: java: error while loading 
shared libraries: ^A_HA^P: cannot open shared object file: No such file or directory
)
sanity check command javac -help exited with code -11 (output: ) (at easybuild/framework/easyblock.py:3639 in 
_sanity_check_step)

laraPPr · 2023-09-06T10:27:48Z

Build only failed for x86_64

eessi-2023.06-eb-4.8.0-system.yml

boegel · 2023-09-06T10:38:50Z

== 2023-09-06 10:12:31,791 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 
in caller_info): Sanity check failed: sanity check command java -help exited with code 127 (output: java: error while loading 
shared libraries: ^A_HA^P: cannot open shared object file: No such file or directory
)
sanity check command javac -help exited with code -11 (output: ) (at easybuild/framework/easyblock.py:3639 in 
_sanity_check_step)

That's... interesting. Does that happen consistently?

ocaisa · 2023-09-06T10:43:01Z

Is the failed installation still available? Can you run an ldd on the binary to see if all the so paths resolve as expected?

laraPPr · 2023-09-06T10:54:51Z

== 2023-09-06 10:12:31,791 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/tools/build_log.py:111 
in caller_info): Sanity check failed: sanity check command java -help exited with code 127 (output: java: error while loading 
shared libraries: ^A_HA^P: cannot open shared object file: No such file or directory
)
sanity check command javac -help exited with code -11 (output: ) (at easybuild/framework/easyblock.py:3639 in 
_sanity_check_step)

That's... interesting. Does that happen consistently?

This part is consistent but the other part is missing or slightly different for other builds.
sanity check command javac -help exited with code -11 (output: ) (at easybuild/framework/easyblock.py:3639 in _sanity_check_step)

ocaisa · 2023-09-06T11:18:19Z

I was able to reproduce this and looking into it I can see:

[EESSI pilot 2023.06] $ patchelf --print-interpreter java 
/cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/lib64/ld-linux-x86-64.so.2
[EESSI pilot 2023.06] $ ./java --help
Segmentation fault (core dumped)
[EESSI pilot 2023.06] $ ldd java
./java: ./java: no version information available (required by /project/60006/easybuild/software/Java/11.0.18/bin/./../lib/jli/libjli.so)
./java: ./java: no version information available (required by /project/60006/easybuild/software/Java/11.0.18/bin/./../lib/jli/libjli.so)
./java: ./java: no version information available (required by /project/60006/easybuild/software/Java/11.0.18/bin/./../lib/jli/libjli.so)
./java: ./java: no version information available (required by /project/60006/easybuild/software/Java/11.0.18/bin/./../lib/jli/libjli.so)
        linux-vdso.so.1 (0x00007ffc979a1000)
        libz.so.1 => /cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/usr/lib64/libz.so.1 (0x0000152d5aab0000)
        libpthread.so.0 => /cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/lib64/libpthread.so.0 (0x0000152d5aaab000)
        libjli.so => /project/60006/easybuild/software/Java/11.0.18/bin/./../lib/jli/libjli.so (0x0000152d59e00000)
        libdl.so.2 => /cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/lib64/libdl.so.2 (0x0000152d5aaa6000)
        libc.so.6 => /cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/lib64/libc.so.6 (0x0000152d5a22e000)
        /cvmfs/pilot.eessi-hpc.org/versions/2023.06/compat/linux/x86_64/lib64/ld-linux-x86-64.so.2 (0x0000152d5aacc000)
         => not found

ocaisa · 2023-09-06T11:31:47Z

Debug log available at https://gist.github.com/ocaisa/1262aba49c8ecee64ee5b2a765eb6fea

ocaisa · 2023-09-06T11:37:37Z

Oh crap, I tested it with https://github.com/boegel/easybuild-easyblocks/blob/19ada471da43ce6b88b4eb6afaad4c237ca91c3a/easybuild/easyblocks/j/java.py (before my changes to easybuilders/easybuild-easyblocks#2557) and the build succeeds

ocaisa · 2023-09-06T11:48:13Z

Ok, I have a fix. The issue is because one of the suggestions from LIBRARY_PATH is a a symlink (lib64 -> lib). EasyBlock PR coming...

boegel · 2023-09-06T11:49:28Z

I re-tested that Java easyblock too before merging it, but only in EESSI pilot 2021.12, not in 2023.06...
Is that why I missed this problem?

eessi-bot · 2023-09-06T15:41:05Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software from boegel
- expanded format: build repository:eessi-2023.06-software
handling command build repository:eessi-2023.06-software resulted in:
- submitted job 7170, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7171, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7172, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7173, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7174, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7175, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7176, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7177, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)

eessi-bot · 2023-09-06T15:41:36Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7170

date	job status	comment
Sep 06 15:41:35 UTC 2023	submitted	job id `7170` awaits release by job manager
Sep 06 15:41:49 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:46:16 UTC 2023	running	job `7170` is running
Sep 06 15:51:06 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7170.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:38Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-haswell for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7171

date	job status	comment
Sep 06 15:41:36 UTC 2023	submitted	job id `7171` awaits release by job manager
Sep 06 15:41:47 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:45:07 UTC 2023	running	job `7171` is running
Sep 06 15:51:04 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7171.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:40Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7172

date	job status	comment
Sep 06 15:41:39 UTC 2023	submitted	job id `7172` awaits release by job manager
Sep 06 15:41:44 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:45:05 UTC 2023	running	job `7172` is running
Sep 06 15:51:03 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7172.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:42Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen2 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7173

date	job status	comment
Sep 06 15:41:41 UTC 2023	submitted	job id `7173` awaits release by job manager
Sep 06 15:43:02 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:45:12 UTC 2023	running	job `7173` is running
Sep 06 15:51:10 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7173.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:44Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7174

date	job status	comment
Sep 06 15:41:43 UTC 2023	submitted	job id `7174` awaits release by job manager
Sep 06 15:42:59 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:45:09 UTC 2023	running	job `7174` is running
Sep 06 15:51:08 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7174.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:46Z

New job on instance eessi-bot-citc-aws for architecture aarch64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7175

date	job status	comment
Sep 06 15:41:45 UTC 2023	submitted	job id `7175` awaits release by job manager
Sep 06 15:42:56 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:46:24 UTC 2023	running	job `7175` is running
Sep 06 15:59:26 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7175.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:48Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_n1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7176

date	job status	comment
Sep 06 15:41:47 UTC 2023	submitted	job id `7176` awaits release by job manager
Sep 06 15:42:54 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:46:21 UTC 2023	running	job `7176` is running
Sep 06 15:52:15 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7176.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

eessi-bot · 2023-09-06T15:41:50Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7177

date	job status	comment
Sep 06 15:41:49 UTC 2023	submitted	job id `7177` awaits release by job manager
Sep 06 15:42:51 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 15:46:19 UTC 2023	running	job `7177` is running
Sep 06 15:52:13 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-7177.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts No artefacts were created or found.

boegel · 2023-09-06T17:00:43Z

Hmm, builds are OK, but creating tarball failed:

>> Collecting list of files/directories to include in tarball via /tmp/overlay-upper/versions...
handling Java/.modulerc
ls: cannot access '2023.06/software/linux/x86_64/generic/software/Java/.modulerc': No such file or directory

…s no corresponding directory under software/

boegel · 2023-09-06T19:30:35Z

Problem with .modulerc.lua should be fixed in 25f2169, so triggering the build again to retry...

boegel · 2023-09-06T19:31:10Z

bot: build repo:eessi-2023.06-software arch:x86_64/generic

eessi-bot · 2023-09-06T19:31:13Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software arch:x86_64/generic from boegel
- expanded format: build repository:eessi-2023.06-software architecture:x86_64/generic
handling command build repository:eessi-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 7178, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)

eessi-bot · 2023-09-06T19:31:19Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7178

date	job status	comment
Sep 06 19:31:18 UTC 2023	submitted	job id `7178` awaits release by job manager
Sep 06 19:32:03 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:36:07 UTC 2023	running	job `7178` is running
Sep 06 19:42:17 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7178.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1694029280.tar.gz` size: 185 MiB (194854785 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/generic/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/generic/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

boegel · 2023-09-06T19:44:50Z

bot: build repo:eessi-2023.06-software

eessi-bot · 2023-09-06T19:44:53Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build repo:eessi-2023.06-software from boegel
- expanded format: build repository:eessi-2023.06-software
handling command build repository:eessi-2023.06-software resulted in:
- submitted job 7179, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7180, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7181, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7182, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7183, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7184, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7185, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)
- submitted job 7186, for details & status see {2023.06}[SYSTEM] Java v11 #327 (comment)

eessi-bot · 2023-09-06T19:45:22Z

New job on instance eessi-bot-citc-aws for architecture x86_64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7179

date	job status	comment
Sep 06 19:45:21 UTC 2023	submitted	job id `7179` awaits release by job manager
Sep 06 19:46:40 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:50:01 UTC 2023	running	job `7179` is running
Sep 06 19:55:57 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7179.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1694030072.tar.gz` size: 185 MiB (194851908 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/generic/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/generic/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:03:48 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1694030072.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:24Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-haswell for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7180

date	job status	comment
Sep 06 19:45:23 UTC 2023	submitted	job id `7180` awaits release by job manager
Sep 06 19:46:38 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:47:43 UTC 2023	running	job `7180` is running
Sep 06 19:53:36 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7180.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-haswell-1694029942.tar.gz` size: 185 MiB (194873973 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/intel/haswell/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/intel/haswell `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:03:37 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-haswell-1694029942.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:26Z

New job on instance eessi-bot-citc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7181

date	job status	comment
Sep 06 19:45:25 UTC 2023	submitted	job id `7181` awaits release by job manager
Sep 06 19:46:35 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:49:57 UTC 2023	running	job `7181` is running
Sep 06 19:55:56 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7181.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1694030051.tar.gz` size: 185 MiB (194885473 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:04:41 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1694030051.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:27Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen2 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7182

date	job status	comment
Sep 06 19:45:27 UTC 2023	submitted	job id `7182` awaits release by job manager
Sep 06 19:46:33 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:49:55 UTC 2023	running	job `7182` is running
Sep 06 19:55:54 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7182.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1694030069.tar.gz` size: 185 MiB (194858755 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:04:09 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1694030069.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:29Z

New job on instance eessi-bot-citc-aws for architecture x86_64-amd-zen3 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7183

date	job status	comment
Sep 06 19:45:28 UTC 2023	submitted	job id `7183` awaits release by job manager
Sep 06 19:46:30 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:49:52 UTC 2023	running	job `7183` is running
Sep 06 19:55:52 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7183.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen3-1694030069.tar.gz` size: 185 MiB (194859795 bytes) entries: 624 modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/x86_64/amd/zen3/software `Java/11.0.18` other under 2023.06/software/linux/x86_64/amd/zen3 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:04:53 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen3-1694030069.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:31Z

New job on instance eessi-bot-citc-aws for architecture aarch64-generic for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7184

date	job status	comment
Sep 06 19:45:30 UTC 2023	submitted	job id `7184` awaits release by job manager
Sep 06 19:46:28 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:51:07 UTC 2023	running	job `7184` is running
Sep 06 19:58:01 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7184.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1694030245.tar.gz` size: 182 MiB (191649130 bytes) entries: 624 modules under 2023.06/software/linux/aarch64/generic/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/aarch64/generic/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/generic `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:03:58 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1694030245.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:33Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_n1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7185

date	job status	comment
Sep 06 19:45:32 UTC 2023	submitted	job id `7185` awaits release by job manager
Sep 06 19:46:25 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:49:49 UTC 2023	running	job `7185` is running
Sep 06 19:55:51 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7185.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_n1-1694030077.tar.gz` size: 182 MiB (191662785 bytes) entries: 624 modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/aarch64/neoverse_n1/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/neoverse_n1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:04:30 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_n1-1694030077.tar.gz` to S3 bucket succeeded

eessi-bot · 2023-09-06T19:45:34Z

New job on instance eessi-bot-citc-aws for architecture aarch64-neoverse_v1 for repository eessi-2023.06-software in job dir /mnt/shared/home/bot/eessi-bot-software-layer/jobs/2023.09/pr_327/7186

date	job status	comment
Sep 06 19:45:33 UTC 2023	submitted	job id `7186` awaits release by job manager
Sep 06 19:46:21 UTC 2023	released	job awaits launch by Slurm scheduler
Sep 06 19:49:47 UTC 2023	running	job `7186` is running
Sep 06 19:55:49 UTC 2023	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-7186.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-1694030069.tar.gz` size: 182 MiB (191658504 bytes) entries: 624 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `Java/11.0.18.lua` `Java/.modulerc.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `Java/11.0.18` other under 2023.06/software/linux/aarch64/neoverse_v1 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`
Sep 06 20:04:19 UTC 2023	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_v1-1694030069.tar.gz` to S3 bucket succeeded

boegel · 2023-09-07T05:44:35Z

all staging PRs merged, deploy under way...

{2023.06}[foss/2022b] waLBerla v6.1

lara added 3 commits September 6, 2023 11:13

{2023.06}[SYSTEM] Java v11.0.18

69d4c01

add Java

41ed8d8

update eessi-2023.06-eb-4.8.0-system.yml

c0a3f10

laraPPr mentioned this pull request Sep 6, 2023

{2023.06}[foss/2021b] TensorFlow v2.7.1 #321

Closed

add right easystack-file

c3ce1cb

boegel requested changes Sep 6, 2023

View reviewed changes

eessi-2023.06-eb-4.8.0-system.yml Outdated Show resolved Hide resolved

change Java

95370cd

laraPPr added the pilot-2023.06 label Sep 6, 2023

laraPPr changed the title ~~{2023.06}[SYSTEM] Java v11.0.18~~ {2023.06}[SYSTEM] Java v11 Sep 6, 2023

filter out .modulerc.lua (for Java) in create_tarball.sh since there'…

25f2169

…s no corresponding directory under software/

boegel approved these changes Sep 6, 2023

View reviewed changes

boegel added the bot:deploy Ask bot to deploy missing software installations to EESSI label Sep 6, 2023

boegel merged commit e3bfcdf into EESSI:2023.06 Sep 7, 2023
74 checks passed

trz42 pushed a commit to trz42/software-layer that referenced this pull request Apr 15, 2024

Merge pull request EESSI#327 from trz42/nessi-2023.06-walberla-61-2022b

95b8776

{2023.06}[foss/2022b] waLBerla v6.1

{2023.06}[SYSTEM] Java v11 #327

{2023.06}[SYSTEM] Java v11 #327

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