{2023.06}[foss/2023a] Single-cell-python-bundle 2024.02 #2089
Workflow file for this run
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# documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | |
name: Tests for init scripts | |
on: [push, pull_request] | |
permissions: | |
contents: read # to fetch code (actions/checkout) | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python: [3.7, 3.8, 3.9, '3.10'] | |
fail-fast: false | |
steps: | |
- name: checkout | |
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 | |
- name: set up Python | |
uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5.0.0 | |
with: | |
python-version: ${{matrix.python}} | |
architecture: x64 | |
- name: install Python packages | |
run: | | |
pip install archspec==0.2.2 pytest | |
- name: unit tests for eessi_software_subdir_for_host.py script | |
run: | |
pytest -v init/test.py | |
- name: test eessi_software_subdir_for_host.py script | |
env: | |
EESSI_X86_64: /tmp/EESSI/software/linux/x86_64 | |
run: | | |
mkdir -p ${EESSI_X86_64}/intel/{pentium4,sandybridge,haswell,skylake_avx512} ${EESSI_X86_64}/generic | |
python3 ./init/eessi_software_subdir_for_host.py /tmp/EESSI > out.txt | |
grep '^x86_64/' out.txt | |
# check override via $EESSI_SOFTWARE_SUBDIR_OVERRIDE | |
export EESSI_SOFTWARE_SUBDIR_OVERRIDE=x86_64/intel/pentium4 | |
python3 ./init/eessi_software_subdir_for_host.py /tmp/EESSI > out.txt | |
grep '^x86_64/intel/pentium4$' out.txt |