{2023.06}[foss/2023b] GROMACS 2024.3 #331
Workflow file for this run
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| # documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions | |
| name: Tests for eessi_module_functionality in software.eessi.io | |
| on: | |
| push: | |
| branches: [ "*-software.eessi.io" ] | |
| pull_request: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| EESSI_VERSION: | |
| - 2023.06 | |
| steps: | |
| - name: Check out software-layer repository | |
| uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 | |
| - name: Mount EESSI CernVM-FS pilot repository | |
| uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0 | |
| with: | |
| cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb | |
| cvmfs_http_proxy: DIRECT | |
| cvmfs_repositories: software.eessi.io | |
| - name: Test for making sure spider cache is being used and not being rebuilt | |
| run: | | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod | |
| export MODULEPATH=init/modules | |
| configfile="configfile.txt" | |
| module -T load EESSI/${{matrix.EESSI_VERSION}} | |
| module --config > "${configfile}" 2>&1 | |
| grep cache "${configfile}" | grep software | grep -v compat | |
| if timeout 10s bash -c "LMOD_PAGER=none module --terse avail" && grep cache "${configfile}" | grep software | grep -v compat; then | |
| echo "EESSI spider cache is being used" | |
| else | |
| echo "EESSI spider cache is being rebuilt" >&2 | |
| exit 1 | |
| fi | |
| env | grep LMOD | |
| module purge | |
| unset MODULEPATH | |
| - name: Test for archdetect_cpu functionality with invalid path | |
| run: | | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod | |
| export MODULEPATH=init/modules | |
| set +e # Do not exit immediately if a command exits with a non-zero status | |
| export EESSI_ARCHDETECT_OPTIONS="dummy/cpu" | |
| outfile="outfile.txt" | |
| module load EESSI/${{matrix.EESSI_VERSION}} > "${outfile}" 2>&1 | |
| cat "${outfile}" | |
| if grep -q "Software directory check" "${outfile}"; then | |
| echo "Test for picking up invalid path on \${archdetect_cpu} PASSED" | |
| else | |
| echo "Test for picking up invalid path on \${archdetect_cpu} FAILED" >&2 | |
| exit 1 | |
| fi | |
| unset EESSI_ARCHDETECT_OPTIONS | |
| set -e # Re-enable exit on non-zero status | |
| - name: Test for expected variables while adding dummy cpu archs and loading EESSI module | |
| run: | | |
| . /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/compat/linux/$(uname -m)/usr/share/Lmod/init/bash # Initialise Lmod | |
| export MODULEPATH=init/modules | |
| CPU_ARCH=$(./init/eessi_archdetect.sh -a cpupath) | |
| export EESSI_ARCHDETECT_OPTIONS="dummy/cpu:${CPU_ARCH}:dummy1/cpu1" | |
| moduleoutfile="moduleout.txt" | |
| sourceoutfile="sourceout.txt" | |
| module load EESSI/${{matrix.EESSI_VERSION}} | |
| env | grep -E '^(EESSI_S|EESSI_C)' | sort > "${moduleoutfile}" | |
| module unload EESSI/${{matrix.EESSI_VERSION}} | |
| source /cvmfs/software.eessi.io/versions/${{matrix.EESSI_VERSION}}/init/bash | |
| env | grep -E '^(EESSI_S|EESSI_C)' | sort > "${sourceoutfile}" | |
| cat "${moduleoutfile}" | |
| cat "${sourceoutfile}" | |
| if (diff "${moduleoutfile}" "${sourceoutfile}" > /dev/null); then | |
| echo "Test for checking env variables PASSED" | |
| else | |
| echo "Test for checking env variables FAILED" >&2 | |
| exit 1 | |
| fi | |