Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Adding changes to Pedro Arduino use case #47

Merged
merged 14 commits into from
Jun 25, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Binary file not shown.

This file was deleted.

This file was deleted.

1,569 changes: 0 additions & 1,569 deletions user-guide/docs/usecases/arduino/FreeField-JupyterNB/schematic.eps

This file was deleted.

Binary file not shown.
Binary file not shown.
Binary file not shown.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-1.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-10.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-2.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-3.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-4.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-5.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-6.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-7.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-8.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-9.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-Eq3.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC2-Arduino-Eq4.png
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file modified user-guide/docs/usecases/arduino/img/UC3-Arduino-0.png
Diff not rendered.
19 changes: 10 additions & 9 deletions user-guide/docs/usecases/arduino/usecase.md
Original file line number Diff line number Diff line change
Expand Up @@ -17,12 +17,14 @@ A collection of educational notebooks to introduce model-parameter calibration a
### Resources

#### Jupyter Notebooks
The following Jupyter notebooks are available to facilitate the analysis of each case. They are described in details in this section. You can access and run them directly on DesignSafe by clicking on the "Open in DesignSafe" button.
The following Jupyter notebooks are made available to facilitate the analysis of each case. They are described in detail in this section. You can access and run them directly on DesignSafe by clicking on the "Open in DesignSafe" button.

| Site Response | Notebook |
| :-------: | :---------: |
| FreeField Response | freeFieldJupyterPM4Sand_Community.ipynb <br> [![Open In DesignSafe](https://raw.githubusercontent.com/geoelements/LearnMPM/main/DesignSafe-Badge.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/University_of_Washington/freeFieldJupyterPM4Sand/freeFieldJupyterPM4Sand_Community.ipynb) |

---

| quoFEM | Notebook |
| :-------: | :---------: |
| Sensitivity analysis | quoFEM-Sensitivity.ipynb <br> [![Open In DesignSafe](https://raw.githubusercontent.com/geoelements/LearnMPM/main/DesignSafe-Badge.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/University_of_Washington/quoFEM_Example1/GlobalSensitivity/quoFEM-Sensitivity.ipynb)|
Expand All @@ -33,23 +35,23 @@ The following Jupyter notebooks are available to facilitate the analysis of each
#### DesignSafe Resources
The following DesignSafe resources were used in developing this use case.

* [DesignSafe - Jupyter notebooks on DS Juypterhub](https://www.designsafe-ci.org/rw/workspace/#!/Jupyter::Analysis)<br/>
* [SimCenter - quoFEM](https://simcenter.designsafe-ci.org/research-tools/quofem-application)<br/>
* [Simulation on DesignSafe - OpenSees](https://www.designsafe-ci.org/rw/workspace/#!/OpenSees::Simulation)<br/>
* [DesignSafe - Jupyter notebooks on DS Juypterhub](https://www.designsafe-ci.org/rw/workspace/#!/Jupyter::Analysis)
* [SimCenter - quoFEM](https://simcenter.designsafe-ci.org/research-tools/quofem-application)
* [Simulation on DesignSafe - OpenSees](https://www.designsafe-ci.org/rw/workspace/#!/OpenSees::Simulation)


### Background

#### Citation and Licensing
* Please cite [Aakash B. Satish et al. (2022)](https://doi.org/10.1007/978-3-031-11898-2_152){:target="_blank"} to acknowledge the use of resources from this use case.<br/>
* Please cite [Aakash B. Satish et al. (2022)](https://doi.org/10.1007/978-3-031-11898-2_152){:target="_blank"} to acknowledge the use of resources from this use case.

* Please cite [Sang-Ri Yi et al. (2022)](https://doi.org/10.1007/978-3-031-30125-4_6){:target="_blank"} to acknowledge the use of resources from this use case.<br/>
* Please cite [Sang-Ri Yi et al. (2022)](https://doi.org/10.1007/978-3-031-30125-4_6){:target="_blank"} to acknowledge the use of resources from this use case.

* Please cite [Chen, L. et al. (2021)](https://peer.berkeley.edu/sites/default/files/2021_chen_final.pdf){:target="_blank"} to acknowledge the use of resources from this use case.

* Please cite [Rathje et al. (2017)](https://doi.org/10.1061/(ASCE)NH.1527-6996.0000246){:target="_blank"} to acknowledge the use of DesignSafe resources.

* This software is distributed under the [GNU General Public License](https://www.gnu.org/licenses/gpl-3.0.html){:target="_blank"} .
* This software is distributed under the [GNU General Public License](https://www.gnu.org/licenses/gpl-3.0.html){:target="_blank"}.

### Description

Expand All @@ -58,8 +60,7 @@ Seismic site response refers to the way the ground responds to seismic waves dur
Site response analysis for liquefiable soils is fundamental in the estimation of demands on civil infrastructure including buildings and lifelines. For this purpose, current state of the art in numerical methods in geotechnical engineering require the use of advance constitutive models and fully couple nonlinear finite element (FEM) tools. Advanced constitutive models require calibration of material parameters based on experimental tests. These parameters include uncertainties that in turn propagate to uncertenties in the estimation of demands. The products included in this use-case provide simple examples showing how to achieve site response analysis including parameter identification and uncertainty quantification using SimCenter tools and the DesignSafe cyber infrastructure.



![Propagation of vertical waves in site response analysis"](./img/SRschematic2.PNG "Fig.1 - Site response problem")
![Propagation of vertical waves in site response analysis](img/UC1-Arduino-1-SRschematic2.png "Fig.1 - Site response problem")
<p style="text-align: center;"> Fig.1 - Site response problem </p>

### Implementation
Expand Down
280 changes: 0 additions & 280 deletions user-guide/docs/usecases/arduino/usecase_OLD.md

This file was deleted.

Loading