Updating workflows/bacterial_genomics/bacterial_genome_annotation fro…

…m 1.1.2 to 1.1.3 (galaxyproject#518) Co-authored-by: planemo-autoupdate <[email protected]>
Delphine-L · Sep 9, 2024 · a2c2012 · a2c2012
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diff --git a/workflows/bacterial_genomics/bacterial_genome_annotation/CHANGELOG.md b/workflows/bacterial_genomics/bacterial_genome_annotation/CHANGELOG.md
@@ -1,5 +1,10 @@
 # Changelog
 
+## [1.1.3] 2024-09-09
+
+### Automatic update
+- `toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.3+galaxy0` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.4+galaxy0`
+
 ## [1.1.2] - 2024-07-19
 
 - PlasmidFinder database correction in .ga

diff --git a/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation.ga b/workflows/bacterial_genomics/bacterial_genome_annotation/bacterial_genome_annotation.ga
@@ -27,7 +27,7 @@
     ],
     "format-version": "0.1",
     "license": "GPL-3.0-or-later",
-    "release": "1.1.2",
+    "release": "1.1.3",
     "name": "bacterial_genome_annotation",
     "steps": {
         "0": {
@@ -632,7 +632,7 @@
         },
         "7": {
             "annotation": "",
-            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.3+galaxy0",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.4+galaxy0",
             "errors": null,
             "id": 7,
             "input_connections": {
@@ -905,15 +905,15 @@
                     "output_name": "summary_txt"
                 }
             },
-            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.3+galaxy0",
+            "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/bakta/bakta/1.9.4+galaxy0",
             "tool_shed_repository": {
-                "changeset_revision": "ba6990f72184",
+                "changeset_revision": "d77802fe76f7",
                 "name": "bakta",
                 "owner": "iuc",
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             },
             "tool_state": "{\"annotation\": {\"complete\": false, \"prodigal\": {\"__class__\": \"RuntimeValue\"}, \"translation_table\": \"11\", \"keep_contig_headers\": false, \"replicons\": {\"__class__\": \"RuntimeValue\"}, \"compliant\": false, \"proteins\": {\"__class__\": \"RuntimeValue\"}, \"meta\": false, \"regions\": {\"__class__\": \"RuntimeValue\"}}, \"input_option\": {\"input_file\": {\"__class__\": \"ConnectedValue\"}, \"min_contig_length\": null, \"bakta_db_select\": {\"__class__\": \"ConnectedValue\"}, \"amrfinder_db_select\": {\"__class__\": \"ConnectedValue\"}}, \"organism\": {\"genus\": null, \"species\": null, \"strain\": null, \"plasmid\": null}, \"output_files\": {\"output_selection\": [\"file_tsv\", \"file_gff3\", \"file_ffn\", \"file_plot\", \"file_gbff\", \"file_embl\", \"file_fna\", \"file_faa\", \"hypo_tsv\", \"hypo_fa\", \"file_json\", \"sum_txt\"]}, \"workflow\": {\"skip_analysis\": null}, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
-            "tool_version": "1.9.3+galaxy0",
+            "tool_version": "1.9.4+galaxy0",
             "type": "tool",
             "uuid": "0a32dcad-f456-460e-9e6f-9e306a8fd515",
             "when": null,
@@ -1211,4 +1211,4 @@
     ],
     "uuid": "d55a9e46-a205-4143-b92f-3783499063ed",
     "version": 1
-}
+}