Merge pull request galaxyproject#478 from Delphine-L/VGP1report

VGP 1 - Add workflow report
Delphine-L · Jul 24, 2024 · 1fc8ffe · 1fc8ffe
2 parents 23f5572 + 839005f
commit 1fc8ffe
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diff --git a/workflows/VGP-assembly-v2/kmer-profiling-hifi-VGP1/CHANGELOG.md b/workflows/VGP-assembly-v2/kmer-profiling-hifi-VGP1/CHANGELOG.md
@@ -1,5 +1,9 @@
 # Changelog
 
+## [0.1.6] 2024-07-12
+
+- Add workflow report
+
 ## [0.1.5] 2023-11-20
 
 - Fix author in dockstore

diff --git a/workflows/VGP-assembly-v2/kmer-profiling-hifi-VGP1/kmer-profiling-hifi-VGP1.ga b/workflows/VGP-assembly-v2/kmer-profiling-hifi-VGP1/kmer-profiling-hifi-VGP1.ga
@@ -1,6 +1,7 @@
 {
     "a_galaxy_workflow": "true",
     "annotation": "",
+    "comments": [],
     "creator": [
         {
             "class": "Organization",
@@ -14,8 +15,11 @@
     ],
     "format-version": "0.1",
     "license": "CC-BY-4.0",
-    "release":"0.1.5",
+    "release":"0.1.6",
     "name": "kmer-profiling-hifi-VGP1",
+    "report": {
+        "markdown": "\n# Workflow Execution Report\n\n\n```galaxy\ninvocation_time()\n```\n\n\n```galaxy\nhistory_dataset_as_image(output=\"GenomeScope linear plot\")\n```\n\n```galaxy\nhistory_dataset_as_image(output=\"GenomeScope log plot\")\n```\n\n```galaxy\nhistory_dataset_as_image(output=\"GenomeScope transformed linear plot\")\n```\n\n```galaxy\nhistory_dataset_as_image(output=\"GenomeScope transformed log plot\")\n```\n\n\n## Workflow\n```galaxy\nworkflow_display()\n```\n"
+    },
     "steps": {
         "0": {
             "annotation": "A simple list collection containing PacBio data in either fastq or fasta format",
@@ -33,7 +37,7 @@
             "name": "Input dataset collection",
             "outputs": [],
             "position": {
-                "left": 0.0,
+                "left": 0,
                 "top": 86.5078125
             },
             "tool_id": null,
@@ -69,13 +73,7 @@
             "type": "parameter_input",
             "uuid": "946bcadd-8ab0-4595-9985-abb574539844",
             "when": null,
-            "workflow_outputs": [
-                {
-                    "label": null,
-                    "output_name": "output",
-                    "uuid": "18b69ad3-4c09-46f5-9a4c-bf4097b37fef"
-                }
-            ]
+            "workflow_outputs": []
         },
         "2": {
             "annotation": "Ploidy for the organism being assembled",
@@ -102,13 +100,7 @@
             "type": "parameter_input",
             "uuid": "e3848560-55a2-42a5-ac1a-487ccf084d92",
             "when": null,
-            "workflow_outputs": [
-                {
-                    "label": null,
-                    "output_name": "output",
-                    "uuid": "1fea95fa-67d6-408d-94b6-264107cc19a1"
-                }
-            ]
+            "workflow_outputs": []
         },
         "3": {
             "annotation": "",
@@ -414,6 +406,6 @@
         "Reviewed",
         "VGP"
     ],
-    "uuid": "7542ffba-d083-415e-b745-08d9503debc4",
-    "version": 4
+    "uuid": "0808b15a-7e3e-4b06-b804-f3d2cc73981a",
+    "version": 2
 }