FreeSurfer uses matlab and tries to write startup.m to /mnt/max/home/…

…sniderk; HOME must be writable.
DCAN-Labs · May 13, 2020 · 8f531f2 · 8f531f2
1 parent 3e39079
commit 8f531f2
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -98,6 +98,10 @@ RUN echo "Downloading FreeSurfer ..." \
 
 ENV FREESURFER_HOME=/opt/freesurfer
 
+# FreeSurfer uses matlab and tries to write the startup.m to the HOME dir.
+# Therefore, HOME needs to be a writable dir.
+ENV HOME=/opt
+
 #-----------------------------------------------------------
 # Install FSL v5.0.10
 # FSL is non-free. If you are considering commerical use