Optimize - remove qoi context string manipulation, update ciemss vers…

…ion (#114)

* remove qoi string manipulation

* update optimize test

* need to do a lot of testing with this update.

* update pyciemss version.

pyproject.toml

@@ -40,7 +40,7 @@ httpx = "^0.24.1"
 
 
 [tool.poe.tasks]
-install-pyciemss = "pip install --no-cache-dir git+https://github.com/ciemss/pyciemss.git@f5c5bec731441377b845a3b702f01927113bf462 --use-pep517"
+install-pyciemss = "pip install --no-cache-dir git+https://github.com/ciemss/pyciemss.git@e224fd5737e96a7a64ed9b0512ca4084eb7a4c87 --use-pep517"
 
 
 [tool.pytest.ini_options]

service/models/operations/optimize.py

@@ -28,7 +28,7 @@ class QOI(BaseModel):
     contexts: List[str] = []
 
     def gen_call(self):
-        contexts = [context + "_state" for context in self.contexts]
+        contexts = self.contexts
         qoi_map = {
             QOIMethod.day_average: lambda samples: obs_nday_average_qoi(
                 samples, contexts, 1

tests/examples/optimize/input/request.json

@@ -15,7 +15,7 @@
 		"end": 90
 	},
 	"qoi": {
-		"contexts": ["Infected"],
+		"contexts": ["Infected_state"],
 		"method": "day_average"
 	},
 	"risk_bound": 10.0,