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Handle experiment ID suffix in reproducibility test
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thalassemia authored Jul 20, 2024
1 parent 9184796 commit f45827c
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .github/workflows/pr_tests.yml
Original file line number Diff line number Diff line change
Expand Up @@ -44,14 +44,14 @@ jobs:
- name: Test simulation reproducibility
run: |
python ecoli/experiments/ecoli_master_sim.py \
--generations 1 --no_suffix_time --emitter parquet --emitter_arg out_dir='out' \
--generations 1 --emitter parquet --emitter_arg out_dir='out' \
--experiment_id "parca_1" --daughter_outdir "out/parca_1" \
--sim_data_path "out/parca_1/kb/simData.cPickle" --fail_at_total_time &
python ecoli/experiments/ecoli_master_sim.py \
--generations 1 --no_suffix_time --emitter parquet --emitter_arg out_dir='out' \
--generations 1 --emitter parquet --emitter_arg out_dir='out' \
--experiment_id "parca_2" --daughter_outdir "out/parca_2" \
--sim_data_path "out/parca_2/kb/simData.cPickle" --fail_at_total_time && fg
python runscripts/debug/diff_simouts.py -o "out" "parca_1" "parca_2"
python runscripts/debug/diff_simouts.py -o "out" "parca_1*" "parca_2*"
Two-gens:
runs-on: macos-latest
strategy:
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