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diff --git a/.buildinfo b/.buildinfo
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+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: c975a277d6aad979ed454b29873cdf4c
+tags: 645f666f9bcd5a90fca523b33c5a78b7
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+  <h1>Source code for ecoli.library.convert_update</h1><div class="highlight"><pre>
+<span></span><span class="sd">&quot;&quot;&quot;</span>
+<span class="sd">================================</span>
+<span class="sd">Utilities for Converting Updates</span>
+<span class="sd">================================</span>
+<span class="sd">&quot;&quot;&quot;</span>
+
+<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
+
+
+<div class="viewcode-block" id="convert_numpy_to_builtins">
+<a class="viewcode-back" href="../../../reference/api/ecoli/ecoli.library.convert_update.html#ecoli.library.convert_update.convert_numpy_to_builtins">[docs]</a>
+<span class="k">def</span> <span class="nf">convert_numpy_to_builtins</span><span class="p">(</span><span class="n">update</span><span class="p">):</span>
+<span class="w">    </span><span class="sd">&quot;&quot;&quot;Convert an update to use Python builtins instead of Numpy types</span>
+
+<span class="sd">    Convert the following:</span>
+
+<span class="sd">    - :py:attr:`numpy.int64` to :py:class:`int`</span>
+<span class="sd">    - :py:class:`numpy.str_` to :py:class:`str`</span>
+<span class="sd">    - :py:attr:`numpy.float64` to :py:class:`float`</span>
+
+<span class="sd">    Args:</span>
+<span class="sd">        update: The update to convert. Will not be modified.</span>
+
+<span class="sd">    Returns:</span>
+<span class="sd">        The converted update.</span>
+<span class="sd">    &quot;&quot;&quot;</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">update</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">int64</span><span class="p">):</span>
+        <span class="k">return</span> <span class="nb">int</span><span class="p">(</span><span class="n">update</span><span class="p">)</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">update</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">):</span>
+        <span class="k">return</span> <span class="nb">str</span><span class="p">(</span><span class="n">update</span><span class="p">)</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">update</span><span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">):</span>
+        <span class="k">return</span> <span class="nb">float</span><span class="p">(</span><span class="n">update</span><span class="p">)</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">update</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
+        <span class="k">return</span> <span class="p">{</span>
+            <span class="n">convert_numpy_to_builtins</span><span class="p">(</span><span class="n">key</span><span class="p">):</span> <span class="n">convert_numpy_to_builtins</span><span class="p">(</span><span class="n">val</span><span class="p">)</span>
+            <span class="k">for</span> <span class="n">key</span><span class="p">,</span> <span class="n">val</span> <span class="ow">in</span> <span class="n">update</span><span class="o">.</span><span class="n">items</span><span class="p">()</span>
+        <span class="p">}</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">update</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
+        <span class="k">return</span> <span class="p">[</span><span class="n">convert_numpy_to_builtins</span><span class="p">(</span><span class="n">elem</span><span class="p">)</span> <span class="k">for</span> <span class="n">elem</span> <span class="ow">in</span> <span class="n">update</span><span class="p">]</span>
+    <span class="k">return</span> <span class="n">update</span></div>
+
+
+
+<div class="viewcode-block" id="assert_types_equal">
+<a class="viewcode-back" href="../../../reference/api/ecoli/ecoli.library.convert_update.html#ecoli.library.convert_update.assert_types_equal">[docs]</a>
+<span class="k">def</span> <span class="nf">assert_types_equal</span><span class="p">(</span><span class="n">d1</span><span class="p">,</span> <span class="n">d2</span><span class="p">):</span>
+    <span class="k">assert</span> <span class="nb">type</span><span class="p">(</span><span class="n">d1</span><span class="p">)</span> <span class="o">==</span> <span class="nb">type</span><span class="p">(</span><span class="n">d2</span><span class="p">)</span>
+    <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">d1</span><span class="p">,</span> <span class="nb">dict</span><span class="p">):</span>
+        <span class="k">for</span> <span class="n">key1</span><span class="p">,</span> <span class="n">key2</span> <span class="ow">in</span> <span class="nb">zip</span><span class="p">(</span><span class="nb">sorted</span><span class="p">(</span><span class="n">d1</span><span class="p">),</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">d2</span><span class="p">)):</span>
+            <span class="k">assert</span> <span class="nb">type</span><span class="p">(</span><span class="n">key1</span><span class="p">)</span> <span class="o">==</span> <span class="nb">type</span><span class="p">(</span><span class="n">key2</span><span class="p">)</span>
+            <span class="n">assert_types_equal</span><span class="p">(</span><span class="n">d1</span><span class="p">[</span><span class="n">key1</span><span class="p">],</span> <span class="n">d2</span><span class="p">[</span><span class="n">key2</span><span class="p">])</span></div>
+
+
+
+<span class="k">def</span> <span class="nf">test_convert_numpy_to_builtins</span><span class="p">():</span>
+    <span class="n">update</span> <span class="o">=</span> <span class="p">{</span>
+        <span class="s2">&quot;a&quot;</span><span class="p">:</span> <span class="p">{</span>
+            <span class="s2">&quot;b&quot;</span><span class="p">:</span> <span class="mi">5</span><span class="p">,</span>
+            <span class="s2">&quot;c&quot;</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">(</span><span class="mf">3.14</span><span class="p">),</span>
+            <span class="s2">&quot;d&quot;</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">int64</span><span class="p">(</span><span class="mi">5</span><span class="p">),</span>
+        <span class="p">},</span>
+        <span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">(</span><span class="s2">&quot;e&quot;</span><span class="p">):</span> <span class="p">{</span>
+            <span class="s2">&quot;f&quot;</span><span class="p">:</span> <span class="kc">True</span><span class="p">,</span>
+            <span class="s2">&quot;g&quot;</span><span class="p">:</span> <span class="kc">None</span><span class="p">,</span>
+            <span class="s2">&quot;h&quot;</span><span class="p">:</span> <span class="n">np</span><span class="o">.</span><span class="n">str_</span><span class="p">(</span><span class="s2">&quot;hi&quot;</span><span class="p">),</span>
+        <span class="p">},</span>
+    <span class="p">}</span>
+    <span class="n">converted</span> <span class="o">=</span> <span class="n">convert_numpy_to_builtins</span><span class="p">(</span><span class="n">update</span><span class="p">)</span>
+    <span class="n">expected</span> <span class="o">=</span> <span class="p">{</span>
+        <span class="s2">&quot;a&quot;</span><span class="p">:</span> <span class="p">{</span>
+            <span class="s2">&quot;b&quot;</span><span class="p">:</span> <span class="mi">5</span><span class="p">,</span>
+            <span class="s2">&quot;c&quot;</span><span class="p">:</span> <span class="mf">3.14</span><span class="p">,</span>
+            <span class="s2">&quot;d&quot;</span><span class="p">:</span> <span class="mi">5</span><span class="p">,</span>
+        <span class="p">},</span>
+        <span class="s2">&quot;e&quot;</span><span class="p">:</span> <span class="p">{</span>
+            <span class="s2">&quot;f&quot;</span><span class="p">:</span> <span class="kc">True</span><span class="p">,</span>
+            <span class="s2">&quot;g&quot;</span><span class="p">:</span> <span class="kc">None</span><span class="p">,</span>
+            <span class="s2">&quot;h&quot;</span><span class="p">:</span> <span class="s2">&quot;hi&quot;</span><span class="p">,</span>
+        <span class="p">},</span>
+    <span class="p">}</span>
+    <span class="k">assert</span> <span class="n">converted</span> <span class="o">==</span> <span class="n">expected</span>
+    <span class="n">assert_types_equal</span><span class="p">(</span><span class="n">converted</span><span class="p">,</span> <span class="n">expected</span><span class="p">)</span>
+</pre></div>
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