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CliMA · Jun 20, 2020 · c3decb9 · c3decb9
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Showing 9 changed files with 148 additions and 147 deletions.
diff --git a/.appveyor.yml b/.appveyor.yml
diff --git a/.github/workflows/Tests.yml b/.github/workflows/Tests.yml
@@ -0,0 +1,140 @@
+name: Tests
+
+on:
+  pull_request:
+  push:
+    branches:
+      - staging
+      - trying
+jobs:
+  test-linux:
+    timeout-minutes: 60
+    strategy:
+      fail-fast: true
+
+    runs-on: ubuntu-latest
+
+    steps:
+    - name: Cancel Previous Runs
+      uses: styfle/[email protected]
+      with:
+        access_token: ${{ github.token }}
+
+    - name: Checkout
+      uses: actions/[email protected]
+
+    - name: Set up Julia
+      uses: julia-actions/[email protected]
+      with:
+        version: 1.4
+
+    - name: Install Julia Project Packages
+      # we add this ENV varaible to force PyCall to download and use Conda rather than
+      # the system python (default on Linux), see the PyCall documentation
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.instantiate()'
+
+    - name: Install SciKitLearn Conda Package
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Conda; Conda.add("scikit-learn")'
+
+    - name: Run Unit Tests
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.test(coverage=true)'
+
+    - name: Generate coverage file
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.add("Coverage");
+                               using Coverage;
+                               LCOV.writefile("coverage-lcov.info", Codecov.process_folder())'
+      if: success()
+
+    - name: Submit coverage
+      uses: codecov/[email protected]
+      with:
+        token: ${{secrets.CODECOV_TOKEN}}
+      if: success()
+
+  test-macos:
+    timeout-minutes: 60
+    strategy:
+      fail-fast: true
+
+    runs-on: macos-latest
+
+    steps:
+    - name: Cancel Previous Runs
+      uses: styfle/[email protected]
+      with:
+        access_token: ${{ github.token }}
+
+    - name: Checkout
+      uses: actions/[email protected]
+
+    - name: Set up Julia
+      uses: julia-actions/[email protected]
+      with:
+        version: 1.4
+
+    - name: Install Julia Project Packages
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.instantiate()'
+
+    - name: Install SciKitLearn Conda Package
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Conda; Conda.add("scikit-learn")'
+
+    - name: Run Unit Tests
+      env:
+        PYTHON: ""
+      run: |
+        LD_LIBRARY_PATH=$HOME/.julia/conda/3/lib julia --project=@. -e 'using Pkg; Pkg.test()'
+
+  test-windows:
+    timeout-minutes: 60
+    strategy:
+      fail-fast: true
+
+    runs-on: windows-latest
+
+    steps:
+    - name: Cancel Previous Runs
+      uses: styfle/[email protected]
+      with:
+        access_token: ${{ github.token }}
+
+    - name: Checkout
+      uses: actions/[email protected]
+
+    - name: Set up Julia
+      uses: julia-actions/[email protected]
+      with:
+        version: 1.4
+
+    - name: Install Julia Project Packages
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.instantiate()'
+
+    - name: Install SciKitLearn Conda Package
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Conda; Conda.add(\"scikit-learn\")'
+
+    - name: Run Unit Tests
+      env:
+        PYTHON: ""
+      run: |
+        julia --project=@. -e 'using Pkg; Pkg.test()'
diff --git a/.github/workflows/dockerci.yml b/.github/workflows/dockerci.yml
diff --git a/.travis.yml b/.travis.yml
diff --git a/Dockerfile b/Dockerfile
diff --git a/Manifest.toml b/Manifest.toml
@@ -481,6 +481,7 @@ uuid = "1d6d02ad-be62-4b6b-8a6d-2f90e265016e"
 version = "0.1.2"
 
 [[LibGit2]]
+deps = ["Printf"]
 uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
 
 [[Libdl]]
@@ -657,7 +658,7 @@ uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
 version = "1.0.5"
 
 [[Pkg]]
-deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Test", "UUIDs"]
+deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
 
 [[PoissonRandom]]

diff --git a/Project.toml b/Project.toml
@@ -5,6 +5,7 @@ version = "0.1.0"
 
 [deps]
 Cloudy = "9e3b23bb-e7cc-4b94-886c-65de2234ba87"
+Conda = "8f4d0f93-b110-5947-807f-2305c1781a2d"
 DifferentialEquations = "0c46a032-eb83-5123-abaf-570d42b7fbaa"
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 DocStringExtensions = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"

diff --git a/README.md b/README.md
@@ -12,15 +12,6 @@
 [docs-dev-img]: https://img.shields.io/badge/docs-dev-blue.svg
 [docs-dev-url]: https://CliMA.github.io/CalibrateEmulateSample.jl/dev/
 
-[travis-img]: https://travis-ci.org/CliMA/CalibrateEmulateSample.jl.svg?branch=master
-[travis-url]: https://travis-ci.org/CliMA/CalibrateEmulateSample.jl
-
-[appveyor-img]: https://ci.appveyor.com/api/projects/status/c6eykd0w94pmyjt8/branch/master?svg=true
-[appveyor-url]: https://ci.appveyor.com/project/climate-machine/calibrateemulatesample-jl/branch/master
-
-[docker-ci-img]: https://github.com/CliMA/CalibrateEmulateSample.jl/workflows/DockerCI/badge.svg
-[docker-ci-url]: https://github.com/CliMA/CalibrateEmulateSample.jl/actions
-
 [codecov-img]: https://codecov.io/gh/CliMA/CalibrateEmulateSample.jl/branch/master/graph/badge.svg
 [codecov-url]: https://codecov.io/gh/CliMA/CalibrateEmulateSample.jl
 

diff --git a/bors.toml b/bors.toml
@@ -1,6 +1,8 @@
 status = [
-  "dockerci (1.4, ubuntu-latest)",
+  'test-linux',
+  'test-macos',
+  'test-windows'
 ]
 delete_merged_branches = true
-timeout_sec = 86400
-block_labels = [ "do-not-merge-yet" ]
+timeout_sec = 3600
+block_labels = [ "do-not-merge-yet" ]