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Release 7.0.0 #27

Merged
merged 68 commits into from
Aug 13, 2020
Merged

Release 7.0.0 #27

merged 68 commits into from
Aug 13, 2020

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dvvanessastoiber
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@dvvanessastoiber dvvanessastoiber commented Mar 19, 2020 •
edited by thinkh
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Changelog

Highlights

  • Improve usability of ranking views
    • Dialogs, such as filter, provide a live preview
    • Harmonize dialogs
    • Collapse/Expand of groups is recorded in session history
  • Integration of Tourdino as ranking side panel
    • Support statistical analysis
  • Update to hg38 database
  • New scores
    • Add cell line and tissue scores for HLA Type, MSI Status, and Mutational Burden
    • Add cell line score PRISM drug screen
  • New Ordino tours:
    • Overview of Start Menu
    • Adding Data Columns
  • Improve support for Boolean columns in uploaded Excel files

Contained releases

Checklists

Release preparation

  • Create new release-x.x.x branch (based on develop branch)
  • Collect changes and write release notes
  • Draft release PR in GitHub that merges the release-x.x.x into the master branch

Release dependencies first

In case of dependent Phovea/TDP repositories follow dependency tree from the top:

  • Release dependent repositories if they contain changes first before proceeding here
  • Replace git dependencies in package.json with new version range (e.g., "phovea_core": "^2.3.1" when published on npm or "phovea_core": "github:datavisyn/tdp_core#semver:^8.0.0" for non-published repositories)
  • Commit and push new dependencies
  • Wait until build is successful
  • Repeat with other repositories/dependencies or proceed with next section

Update version

  • Check version numbers of dependencies again
  • Check if build is successful
  • Update this version number following semver
  • Commit and push package.json with new version number
  • Wait until build is successful
  • Assign reviewer and wait for final review
  • Merge this pull request into master branch
  • Add release label (i.e., release: major, release: minor, or release: patch)

Create GitHub release

  • Draft a new release (Code -> Releases -> Draft a new release)
  • Use new version number as tag (e.g., v2.3.1)
  • Copy release notes
  • Publish release

Prepeare next develop release

  • Switch to develop branch
  • Merge master branch into develop (git merge origin/master)
  • Update version in package.json to <next patch version>-SNAPSHOT (e.g., 2.3.1 to 2.3.2-SNAPSHOT)
  • Revert dependencies in package.json to develop branches (e.g., "phovea_core": "github:phovea/phovea_core#develop")
  • Commit and push changes

🏁 Finish line

  • Inform colleagues and customers about the release
  • Celebrate the new release 🥳

thinkh and others added 30 commits October 3, 2019 10:50
@thinkh
Switch to python_3.7 branches
5ef4fbb
@thinkh
Switch back to develop branches
3c058ee
@thinkh
Prepare next dev release
5dd7d9d
@thinkh
Use caleydo cluster in circleci config.yml
ba7ff7d
@thinkh
Merge branch 'develop' into python_3.7
80fd142 
# Conflicts:
#	phovea_product.json
@thinkh
Activate nightly build in circleci config
d89df6d
@thinkh
Activate nightly CircleCI build (#17)
9b362e9 
Activate nightly CircleCI build
@thinkh
Prepare next dev release
792aa08
@thinkh
Merge branch 'develop' into python_3.7
6019ab8
Update config.yml
fe6aa88
Update phovea_product.json
b844aa2
Update config.yml
460c9ca
Update config.yml
00441d0
Update config.yml
47b0905
@dvvanessastoiber
remove _Jenkinsfile_ and _.travis,yml_
7feca4c
@dvvanessastoiber
add command to show installed npm dependencies
3cd76b3
@dvvanessastoiber
use destination instead of removed prefix
d84ea80
@dvvanessastoiber
update _build.js_
9a20107
@dvvanessastoiber
replace / in branchName with underscore
b5e7516
@dvvanessastoiber
update dependencies
ba7cc8d
@rumersdorfer
add CODEOWNERS file
425503b
@thinkh
Ignore errors from npm ls and pip list
f270e72 
`npm ls` fails if some peerDependencies are not installed
Since `showWebDependencies()` function is for debug purposes only, we catch possible promise reject of `npm()` and convert it into Promise.resolve() that it always succeeds. We do something similar in the CircleCI config with the `true` in `npm list --depth=1 || true`.

Since `showPythonTestDependencies()` is for debug purposes only, we catch possible errors and resolve it with status code `0`.
@thinkh
Remove --skipTests in CircleCI config.yml
4841761
@thinkh
Remove --serial flag to activate parallel builds
dd040e0
@thinkh
Add --skipTests flag again to pass build
17ca2cb 
At the moment the CircleCI build is killed, when testing with karma. It looks like our code or test command is not compatible with the CircleCI environment.
add CODEOWNERS file (#20)
4b1e44a 
add CODEOWNERS file
@thinkh
Merge remote-tracking branch 'origin/develop' into python_3.7
33a9d96
Update to Python 3.7 (#19)
607ff29 
Update to Python 3.7
Add tourdino to develop build
c341ae2
Merge pull request #21 from Caleydo/tourdino-develop
3ea7ceb 
Add Tourdino to develop build
rumersdorfer and others added 19 commits April 24, 2020 14:57
@rumersdorfer
Update README.md circleci links
0d32a76
Merge pull request #30 from Caleydo/rumersdorfer-update_README.md
81312f0 
Update README.md circleci links
@rumersdorfer
Update README.md
a2c0ece
Update README.md
a42cc3b
Merge pull request #31 from Caleydo/rumersdorfer-update_README.md
15bdc5e 
Update README.md
@steiner-anita
new workspace changes
492665f
@steiner-anita
update dependencies
3534db4
@steiner-anita
update cache
6b68bbd
@steiner-anita
ignore package-lock.json
07ccc32
Delete package-lock.json
c604a44
@steiner-anita
update cache
4bda4d6
@steiner-anita
Merge branch 'develop' of github.com:Caleydo/ordino_product into develop
9230226
@dvvanessastoiber
update .gitignore
b3d2a94
@dvvanessastoiber
switch branches
a33cd5c
@dvvanessastoiber
add files
a06a480
@dvvanessastoiber
switch to develop
4d0002c
Update phovea_product.json
7b04bf8
Merge pull request #33 from Caleydo/vstoiber/64_move_deploy
337c8ce 
Move deploy files from app to product
@thinkh
Merge branch 'develop' into release-7.0.0
1169629 
# Conflicts:
#	package-lock.json
thinkh
thinkh approved these changes Aug 13, 2020
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Thanks to everyone who contributed to this release!

@thinkh thinkh merged commit c0460c8 into master Aug 13, 2020
@thinkh thinkh deleted the release-7.0.0 branch August 13, 2020 14:46
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@thinkh thinkh thinkh approved these changes

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@dvvanessastoiber @lehnerchristian @thinkh @rumersdorfer @steiner-anita