Skip to content

Commit

Permalink
LGTM badges added
Browse files Browse the repository at this point in the history
  • Loading branch information
CaileanCarter committed Mar 25, 2021
1 parent cc237e0 commit 88feaf2
Showing 1 changed file with 3 additions and 0 deletions.
3 changes: 3 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,6 @@
[![Total alerts](https://img.shields.io/lgtm/alerts/g/CaileanCarter/AbxRxPro.svg?logo=lgtm&logoWidth=18)](https://lgtm.com/projects/g/CaileanCarter/AbxRxPro/alerts/)
[![Language grade: Python](https://img.shields.io/lgtm/grade/python/g/CaileanCarter/AbxRxPro.svg?logo=lgtm&logoWidth=18)](https://lgtm.com/projects/g/CaileanCarter/AbxRxPro/context:python)

# <b>AbxRxPro:</b> antibiotic resistance profiler

AbxRxPro is a web-page visualisation tool for phenotypic antibiotic resistance using the graphing module <em>Plotly</em>. The plot can be annotated with genotypic data from antibiotic resistance genes identifying programmes like RGI (resistance gene identifier), staramr and amrfinder. The AbxRxPro package comes with a Galaxy workflow for the inputting of genome sequences through these antibiotic resistance genes identifiers. Frequencies for genes across your given isolates are plotted in a seperate tab.
Expand Down

0 comments on commit 88feaf2

Please sign in to comment.