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bet
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Signed-off-by: neuronflow <[email protected]>
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neuronflow committed Feb 15, 2024
1 parent dc3e271 commit 9f3e97a
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1 change: 1 addition & 0 deletions brainles_preprocessing/preprocessor.py
Original file line number Diff line number Diff line change
Expand Up @@ -216,6 +216,7 @@ def run(

# Optional: Brain extraction
brain_extraction = any(modality.bet for modality in self.all_modalities)
# print("brain extraction: ", brain_extraction)

if brain_extraction:
bet_dir = os.path.join(self.temp_folder, "brain-extraction")
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