only skullstrip cm if bet is True

Signed-off-by: neuronflow <[email protected]>
BrainLesion · Dec 22, 2023 · 2eba656 · 2eba656
1 parent 68a375a
commit 2eba656
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/brainles_preprocessing/modality.py b/brainles_preprocessing/modality.py
@@ -222,5 +222,6 @@ def extract_brain_region(
             brain_mask_path=atlas_mask_path,
             log_file_path=bet_log,
         )
-        self.current = atlas_bet_cm
+        if self.bet is True:
+            self.current = atlas_bet_cm
         return atlas_mask_path