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add star #7

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11 changes: 8 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -7,14 +7,19 @@
[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
<!-- [![codecov](https://codecov.io/gh/BrainLesion/deep_quality_estimation/graph/badge.svg?token=A7FWUKO9Y4)](https://codecov.io/gh/BrainLesion/deep_quality_estimation) -->

Quality prediction for brain tumor segmentation on scale ranging from 1 to 6 stars &#x2B50;.
Can be used to estimate the quality of a segmentation for evaluation purposes or as e.g. as part of a loss function during model training.
Quality prediction for brain tumor segmentation on a scale ranging from &#x2B50; 1 star to &#x2B50;&#x2B50;&#x2B50;&#x2B50;&#x2B50;&#x2B50; 6 stars inspired by the paper [**Deep Quality Estimation: Creating Surrogate Models for Human Quality Ratings**](https://arxiv.org/abs/2205.10355).
This can be used to estimate the quality of a BraTS glioma segmentation for evaluation purposes or, e.g., as part of a loss function during model training.

> [!NOTE]
> This package expects images in atlas space and segmentation labels in brats style, i.e.
> - `label 1` is the necrotic and non-enhancing tumor core
> - `label 2` is the peritumoral edema
> - `label 3` is the GD-enhancing tumor (used to be `label 4` in older data, both are supported)
> - `label 3` is the GD-enhancing tumor (used to be `label 4` in older data; both are supported)


> [!NOTE]
The model here is not the original model presented in the paper. Instead, it is trained based on individual radiologists' ratings. This way, the model has a chance to learn the variance between radiologists' estimates. It outperforms the model presented in the paper on the test set.


## Installation

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