Merge pull request #6 from ArcanaFramework/develop

added default data type to BIDS store (NiftiGzX)
ArcanaFramework · Apr 14, 2023 · 0a32403 · 0a32403
2 parents 74bc1e1 + b8f0786
commit 0a32403
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/arcana/bids/data.py b/arcana/bids/data.py
@@ -10,7 +10,7 @@
 from arcana.core.data.store import LocalStore
 from fileformats.core import FileSet, Field
 from fileformats.generic import Directory
-from fileformats.medimage.nifti import WithBids
+from fileformats.medimage.nifti import WithBids, NiftiGzX
 from arcana.core.exceptions import ArcanaUsageError
 from arcana.core.data.tree import DataTree
 from arcana.core.data.set import Dataset
@@ -81,6 +81,8 @@ class Bids(LocalStore):
         ["group", "session"],
     )
 
+    DEFAULT_DATATYPE = NiftiGzX
+
     #################################
     # Abstract-method implementations
     #################################

diff --git a/pyproject.toml b/pyproject.toml
@@ -51,7 +51,6 @@ doc = [
     "sphinx-click>=3.1",
 ]
 test = [
-    "codecov",
     "fileformats-testing",
     "medimages4tests >=0.3",
     "pytest>=5.4.3",