Merge wilms-tumor-06-azimuth into main #893
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…apted from previous script
…ectory, not module
…ebook for consistency. notebook got styled too
Co-authored-by: Joshua Shapiro <[email protected]>
Create shell script for wilms-06 workflow
This reverts commit 7109518.
Co-authored-by: Joshua Shapiro <[email protected]>
…passed in the shell script
Wilms-06 update CNV methods (3/3), and run module in CI
…fects the sessioninfo
Co-authored-by: Jaclyn Taroni <[email protected]>
Fix wilms-06 typos
…also removed packages from dependencies.R that don't need to be there since they are in other scripts explicitly
…cker Add zellkonverter to wilms-06 environment
Merge main into feature/wilms-tumor-06-azimuth
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@jaclyn-taroni let me know if you have other ideas/preferences for being able to see a diff here! For me the answer was GitKraken. |
jaclyn-taroni
approved these changes
Nov 19, 2024
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Closes #883
This PR merges the
feature/wilms-tumor-06-azimuthbranch intomain🎉 !Edit: It seems this diff is again way too much for GitHub to display due to all the modified notebooks. Looking at the PR view in GitKraken, I see these files changes, and it's what we expect: